Camelina sativa (false flax): 104762770
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Entry
104762770 CDS
T05044
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
csat04141
Protein processing in endoplasmic reticulum
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104762770
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104762770
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104762770
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104762770
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104762770
03009 Ribosome biogenesis [BR:
csat03009
]
104762770
03110 Chaperones and folding catalysts [BR:
csat03110
]
104762770
04131 Membrane trafficking [BR:
csat04131
]
104762770
03051 Proteasome [BR:
csat03051
]
104762770
03029 Mitochondrial biogenesis [BR:
csat03029
]
104762770
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104762770
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
104762770
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19 complex
104762770
Complex C
Prp19-CDC5 complex
104762770
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104762770
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP70 / DNAK
104762770
Membrane trafficking [BR:
csat04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
104762770
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
104762770
Proteasome [BR:
csat03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
104762770
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
104762770
Exosome [BR:
csat04147
]
Exosomal proteins
Proteins found in most exosomes
104762770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
104762770
NCBI-ProteinID:
XP_010484430
LinkDB
All DBs
Position
18:19981702..19984210
Genome browser
AA seq
652 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKN
QVAMNPVNTVFDAKRLIGRRFSDASVQSDRKLWPFTVISSGTAEKPMIVVNYKGEEKQFA
AEEISSMVLIKMREISEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINE
PTAAAIAYGLDKKATSIGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDF
DNRMVNHFVQEFKRKSKQDITGLARPLRRLRTACERAKRTLSSTAQTTIEIDSLYGGADL
FAPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHEVVLVGGSTRIPKVQQLLQDF
FNGKELCKSINPDEAVAYGAAVQGAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTL
IQRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQ
ITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHK
KKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAETDEFE
DKMKELESICNPIIAKMYQGAGGEAGGPGPHGMDEDAPPAPGGAGPKIEEVD
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaagggagaaggtcctgcgatcggtatcgatcttggtaccacctactcttgt
gttggagtgtggcaacacgaccgtgttgagatcattgctaatgatcaaggtaaccgaacc
acgccgtctttcgtcgctttcaccgacaccgagaggttgatcggagatgctgctaagaac
caggtcgccatgaaccctgttaacactgtcttcgatgcaaagaggttgattggtcgtaga
ttcagtgacgcatctgtccaaagcgacaggaagttgtggcctttcactgtcatctcttct
ggaactgctgagaaaccaatgatcgtagtcaactacaagggtgaagagaaacagttcgcc
gctgaggagatctcttccatggttctcattaagatgcgtgagattagtgaagcttacctt
ggcaccactatcaagaacgctgtggtcaccgttcctgcttacttcaatgactctcagcgt
caagccacaaaggatgctggtgtcatcgctggtttgaatgttctgcgtatcatcaacgag
cccactgctgctgccattgcctacggtcttgacaagaaggccaccagtattggagagaag
aacgttctgatctttgatcttggtggtggtacttttgatgtctctcttcttacaattgaa
gaaggtatctttgaggtcaaggccactgctggagacactcatcttggtggtgaagatttc
gataacagaatggttaaccactttgttcaagagtttaagaggaagagcaagcaggacatc
actggcctcgcaagaccccttaggaggctgagaacagcttgcgagagagcaaagagaact
ctttcttccacggcgcaaacgaccatcgagattgactctctctatggaggagctgacctc
tttgctccaattacccgtgctagattcgaagagcttaacatggatcttttcaggaagtgt
atggagcctgttgagaagtgtctccgtgatgctaagatggacaagagctcagtccatgaa
gttgttcttgtcggtggttccacccgtatccccaaagttcaacagcttctccaagatttc
ttcaatggtaaagagctctgcaagtctatcaaccctgacgaggctgttgcatacggtgca
gccgtccagggagctattctaagcggtgaaggaaacgaaaaggttcaagaccttctcttg
cttgatgtcactcctctctccctcggtcttgaaactgctggtggtgtcatgaccactttg
atccagagaaacacaaccatcccgaccaagaaggagcaggtcttctccacttactcagac
aatcagcccggcgtgttgatccaggtgttcgaaggtgagagagccagaaccaaggacaac
aaccttctcggtaaattcgagctctccggaatccctccggctcctcgtggtgtccctcag
atcactgtctgctttgacatcgatgctaatggtatcctcaacgtatctgctgaggacaag
accaccggacagaagaacaaaatcaccatcacgaatgacaagggtcgtctctccaaggat
gagatcgagaagatggttcaagaggcagagaagtacaagtctgaggacgaggagcacaag
aagaaggttgaagccaagaatgctcttgagaactacgcttacaacatgaggaacaccatc
caggacgagaagattggtgagaagcttcccgcagcagacaagaagaagatcgaggactcc
attgagcaggcgattcagtggctcgagggtaaccagttggctgaaactgacgagtttgaa
gacaagatgaaggaattggagagtatctgcaacccaatcatcgccaagatgtaccaagga
gctggtggtgaagccggtggtccaggtccccatggtatggacgaagatgctcctcctgct
ccagggggtgctggccctaagatcgaggaggtcgactaa
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