Camelina sativa (false flax): 104762796
Help
Entry
104762796 CDS
T05044
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP65
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104762796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104762796
03110 Chaperones and folding catalysts [BR:
csat03110
]
104762796
04121 Ubiquitin system [BR:
csat04121
]
104762796
Enzymes [BR:
csat01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
104762796
Spliceosome [BR:
csat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104762796
Complex C
U4/U6.U5 tri-SnRNP related factors
104762796
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
104762796
Chaperones and folding catalysts [BR:
csat03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
104762796
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
U-box type E3
104762796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
zf-NOSIP
U-box
Rtf2
PcfK
Motif
Other DBs
NCBI-GeneID:
104762796
NCBI-ProteinID:
XP_010484481
LinkDB
All DBs
Position
18:complement(20076596..20079652)
Genome browser
AA seq
594 aa
AA seq
DB search
MGKKQHSKDRMYITKTEWATEWGGAKSKENRTPFKSLPFYCCALTFLPFEDPVCTSDGSV
FEITTIVPYIRKFGKHPVTGAPLKGEDLIPLIFHKNSEGEYHCPVLNKVFTEFTHIVAVK
TTGNVFCYEAIKELNIKTKNWKELITEEPFTRADLITIQNPNAVDSKVTVEFDHVKNGLK
IDDEELKKMNSDPAYNINVSGDIKHMLADLGTEKAKEIALHGGGGNKARNERAAAIAAIL
ESRSKIKEDSKAEEPKQTYSVVDAASASVYGRSADAAKAGSSDKTAARIAMHMAGDRAPV
NTKLVKSRYSSGAASRSFTSTAFTPVTGNDFELIEVEKNPTKKGYVQFRTTHGDLNIELH
CDIAPRACENFITLCERGYYNGVPFHRSIRNFMIQGGDPTGTGSGGESIWGKPFKDEPNS
KLLHTGRGVVSMANSGPHTNGSQFFILYKSAVHLNYKHTVFGGVVGGFATLAAMENVPVD
ESDRPLEEIKIIEANVFVNPYTELEEEEKEKAEKEKNEDKDIEKVGSWYSNPGSGTAEAG
AGGGGVGKYLKAKSSTATKETNGAIDSDLSTIGVSKKRKTTASASSGFKDFSGW
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacagcacagcaaagatcgaatgtacataacaaagacggagtgggcaaca
gaatggggaggcgctaaatccaaagagaatcgtactcctttcaagagtcttcctttctat
tgctgcgcgcttacgtttttgccattcgaagatcctgtgtgtactagcgacgggagtgtt
ttcgagataacaactatagtgccttacattaggaagtttggtaaacatccagttacagga
gcaccattgaaaggagaagatttgattcctctcatctttcacaaaaactctgaaggagag
taccattgtcctgttctgaacaaagtctttactgaatttacacatatagttgctgtgaag
actactggaaacgttttctgctacgaggcaatcaaagaattaaatatcaaaaccaagaat
tggaaggagcttataactgaagaaccattcacaagagccgaccttataacgattcagaat
cctaacgcagttgacagtaaagtcacagtggagtttgatcacgttaaaaatggcctcaag
attgatgatgaagaattgaagaagatgaactctgacccagcttataatataaacgtgtct
ggagatatcaagcatatgcttgcggatcttggaactgaaaaagctaaagagattgcttta
catggtggtggtggaaacaaggcacgtaacgagagagccgctgctattgctgcgattctt
gagtcgagatcaaaaatcaaagaggattctaaagcagaagaaccgaagcagacctacagt
gttgtggatgctgcatctgcttccgtttatggaagaagtgctgatgcagctaaagctggt
tctagtgataaaacagcagcaaggatagctatgcatatggctggagatagagcacctgtt
aatactaaactggtgaagagtcgttactcgtcgggtgctgcttctcgttctttcacttcc
actgcatttactcctgtgaccggaaacgattttgaactaattgaagtcgagaaaaacccg
acaaagaaagggtatgttcagtttcgcacaacacatggcgatttgaacattgagctccat
tgcgatatagctcctagagcatgtgagaatttcatcactctctgtgaacgcggttactac
aacggagttccctttcacagaagcatcaggaactttatgattcaaggtggcgatcctact
ggcacaggatcaggaggtgaatcaatttggggaaagccattcaaagacgagccaaactct
aagttgcttcacacaggaagaggcgtagttagtatggctaatagtggtcctcacacaaat
ggttctcagtttttcattttatacaaatctgcagtccatttaaactacaagcacacagtg
tttggtggagttgttggtggttttgcaacactagcagcaatggagaatgtgcctgtagat
gaaagcgaccgtcctcttgaagagatcaagataatcgaagcaaatgttttcgtgaatcca
tacacggagcttgaagaagaggaaaaagagaaagctgagaaagagaagaacgaagataaa
gacattgagaaggttggatcgtggtacagcaacccgggatcaggaacagcagaagctgga
gccggtggtggtggcgtcgggaaatacttgaaagcgaagagtagtacagctaccaaagag
accaatggtgccatagactctgatctttcaaccattggtgtgtctaagaaaagaaaaact
acagcgtcagcctcctcagggtttaaagatttctctggctggtaa
DBGET
integrated database retrieval system