Camelina sativa (false flax): 104762833
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Entry
104762833 CDS
T05044
Name
(RefSeq) small RNA degrading nuclease 3 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104762833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104762833
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
RNases
104762833
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Ortholog
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GFIT
Motif
Pfam:
RNase_T
RRM_fung
DNA_pol_A_exo1
PIN_12
HTH_36
Motif
Other DBs
NCBI-GeneID:
104762833
NCBI-ProteinID:
XP_010484526
UniProt:
A0ABM0XE06
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Position
18
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AA seq
640 aa
AA seq
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MEHKLATAEKKMLVDLVKLVQRRGLEGENGGWKEFLNVYDKKFGSSLSDPARRSNDVLVA
FLMSFKKKEDMQLIARIMQCSANRDLIEKFKEESPAKETPEQRLVRLTIAHYQYPTAYSF
PSHSKDWFVTSLGKKKSKVVKSTRMLAIDCEMVTCEDGTDAVVRVGAVDRDLKVVLDKFV
KPEKPVLNYKTDITGVTAEDLERATLSVTDIQKKLRRFLSVGTILVGHGLHNDLEVLRID
HARVIDTSFVYEFANAPIDKRPSLNNLCKYVLGEELRMAGAAHNCVHDAAAAMKLVLAVV
EKGVETTIQQTPEMLEAEKARHEARQEAGKTQLLLHKIPPHVSSQELQGVLTGDFTVGVR
PPQKLGGFYTAVVDFSSPEEANQAFENVQADIGKDKGGLPQKEVAFQLSSGLKAKLFVRK
MVHDEISAPKRARTEEEENNESSSKRQKREDESEEINEAVVNQREDDKKKLLLHKIPLSV
PSEELQGAISGNFTLETMPARRKGKYYNAVVSFKSAEEANEAFENVRGDAVKDQGGLAQK
MVAFKLSSGSGTCLYVRKMVQDESEEAKEENVNHCKDHLKEIEALKEKLKAKDFANSSEG
QSKEIEELKLKLKAKEHQIIAQDKIIANLKAKLEKKQSKS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggagcataaactagctactgccgagaaaaaaatgctagtagacttggtgaagctagtc
cagagacgtggtttagaaggcgaaaatggaggatggaaggagtttttgaatgtttacgac
aagaagttcgggtcgagtttgagtgatcctgcgagacgttccaatgatgttttggttgct
tttcttatgtccttcaaaaagaaagaagatatgcagctaatagctaggatcatgcagtgt
agtgctaatcgtgatctaattgagaaattcaaggaagaatctccggctaaagagactcct
gagcagagactagttcgattgactattgcgcattaccagtaccctacagcctattccttc
ccttctcattccaaggattggtttgtaacttcgcttggaaagaagaagtctaaagtggtg
aaatctaccagaatgcttgctattgattgtgagatggttacctgtgaagatgggaccgac
gctgtagttagagttggtgctgtggaccgcgacttaaaggtggttcttgacaaatttgtg
aaaccggagaaaccagttcttaactataagacggatattactggagttactgctgaggat
cttgagagagctactctatctgttacagatattcaaaaaaaattgcggaggtttctttct
gtgggaactattttggtagggcatggtttgcataatgatcttgaagtgttgaggatagat
catgcgagagtaatagatacttcatttgtatatgagtttgccaatgcaccaatagataag
agaccttctttgaacaatctatgcaagtatgttttaggtgaagaactgcgaatggctggt
gctgctcacaattgtgttcatgacgcagcagctgccatgaaacttgtacttgctgttgta
gaaaaaggagtagagactacaattcaacaaactccagaaatgttggaggctgagaaggca
agacatgaggcaagacaagaagctggtaagacacagcttctccttcataaaatccctccc
catgtttcatctcaagagttacaaggagttcttacaggggatttcacagtcggtgttagg
ccaccacaaaaactaggaggtttctatactgcagtcgttgattttagtagtccagaagaa
gcaaatcaagcatttgaaaatgttcaagcagacatagggaaggataaagggggtttgcca
caaaaagaggttgcgtttcagctgagttcaggattaaaagctaaattatttgttcgtaaa
atggttcatgatgaaatatctgcaccaaagagagctagaacagaggaggaggagaataat
gagagttcttctaagagacaaaagagagaagatgaatctgaggagatcaatgaagcagtt
gtaaaccaaagagaggatgataagaaaaagctcctccttcataaaatccctctcagtgtc
ccgtctgaagagttacaaggagctatttccggaaatttcacacttgaaaccatgccagca
agaaggaaaggaaaatattataatgcagttgttagttttaagagtgcagaagaagcaaat
gaagcatttgaaaacgttagaggagacgcagttaaggatcaagggggtttggcacaaaaa
atggttgcgtttaagctgagttcaggatcaggaacttgtttatatgttcgtaaaatggtt
caagatgaatctgaggaggccaaagaggaaaatgtaaaccattgtaaggatcatttaaag
gaaattgaagcactgaaggaaaagctcaaagctaaggacttcgccaacagctctgaaggt
cagtcaaaggaaattgaagaactaaagctgaaactcaaagccaaggaacatcagatcata
gctcaggataagattatagctaacctcaaagcgaaactggagaagaaacagtcaaagagt
tga
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