Camelina sativa (false flax): 104762959
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Entry
104762959 CDS
T05044
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104762959
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104762959
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104762959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-rbx1
zf-C3HC4_3
zf-RING_16
zf-RING_4
zf-ANAPC11
zf-C3HC4_4
Prok-RING_4
Rad50_zn_hook
zf-C3HC4_5
DUF3262
zf-Nse
Motif
Other DBs
NCBI-GeneID:
104762959
NCBI-ProteinID:
XP_010484679
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All DBs
Position
18:complement(20771036..20773033)
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AA seq
326 aa
AA seq
DB search
MRLIVVVSRRRCLLLVLGGAPFLCSLLRLSLATVVLNSISASFPDLPAKFDGSVTKNGIC
GALYVADPLDGCSPLLHAATSNNNLTQQQRTRTRTNFALIIRGECSFEDKLLNAQKSGFR
AVIVYDNFDNQDLVVMKVNPQNITVVAVFVSNVAGEILSKYARGRDGECCLYPPTKGSAW
TVLAISFFSLLLILTFLLLAFFAPRHWTLWRRGTHNRTIRVDANLVHSLPSFTFTTDSSS
RHNPGDTCPICLEDYISGESLRLLPCQHAFHLSCIDSWLTKWGTSCPVCKHDISSETFSS
EVHKRECPRTDTSTSRFAFAQSSQSH
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagactcatcgtcgtcgtctcaagaagaaggtgtctactactagtactggggggtgct
ccttttctctgttctctgctacggttatcgctcgccacggttgtcctcaattccatctct
gcctcttttccggatctccctgctaaatttgacggctccgtgaccaaaaacggaatatgt
ggagctctatacgtggcagatcctctcgacggctgctcaccgctgctccacgccgccaca
tccaacaacaacttgactcaacaacagaggacgaggactaggactaacttcgctttgatc
atacgaggcgaatgttcttttgaagataagctcctcaacgcacagaagtcaggttttcgt
gctgtcattgtctatgacaactttgacaaccaagatctcgtcgttatgaaggttaaccct
cagaacattacagttgttgcagtcttcgtttcaaatgtcgccggtgagattctgagcaag
tatgccagaggccgagatggtgaatgctgcctttatccccctaccaaagggagcgcttgg
actgtgctcgccatctctttcttctctctccttctcatcctcactttcctcttgcttgcc
ttctttgctcccagacactggaccctatggcgtcgaggcacccacaaccggaccatcagg
gttgatgctaaccttgtccactcactcccctccttcaccttcactactgattcttcttct
cgccacaatcccggggatacttgtccaatatgtctcgaggattatatctctggagaatcc
ctcagacttctcccctgccaacacgcttttcacttgagttgcatcgactcttggttgaca
aaatggggtacatcttgcccagtatgcaagcatgacataagctccgagactttctcttct
gaggtacataaacgagagtgtcctagaacggatacaagtacgagtagatttgcatttgct
caatccagtcaaagccattaa
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