Camelina sativa (false flax): 104763832
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Entry
104763832 CDS
T05044
Name
(RefSeq) probable pectate lyase 7
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104763832
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104763832
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
VP4_2
Motif
Other DBs
NCBI-GeneID:
104763832
NCBI-ProteinID:
XP_010485518
UniProt:
A0ABM0XG53
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Position
19:626393..628572
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AA seq
473 aa
AA seq
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METARLVKLVCVICIASLIPTIRANVAETDEYWVNKANEARKHTLMAYHPDPYDIVDHFH
ERHYDNSTDVEGTEEDTAVDSAEDEDVIEMTSSPTNSTRRSLSGKRRGRGKWSKLKGPCT
ASNPIDKCWRCQPDWAKRRKRLVRCVRGFGYRTTGGKRGRIYVVTSPRDDDTVNPRPGTL
RHAVIQKEPLWIIFKHDMSIRLSQELMIASHKTIDARGANVHIAYGAGITMQYVHNIIIH
GLHVHHIVTSSGGLIRDSIDHFGQRGQADGDGISIFGATNIWLDHISMSKCQDGLIDAIM
GSTAITISNSHFTHHNDVMLLGAQDHNQDDKKMQVTVAYNHFGKGLVQRMPRIRWGFVHV
VNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKQHYREVTKRDYAPEAEWKNWNWRSDK
DYFLNGAYFRQSGNPHFKCSHSRQQMIKPKHGVAVSKLTKYAGALDCRVGKAC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggagacggctaggcttgtgaagttagtgtgtgtgatttgtattgccagtttgattccg
accatacgagccaatgttgccgagaccgatgagtattgggtaaataaggccaatgaagct
cgtaaacatactcttatggcttatcatcctgatccttatgacatcgtcgaccacttccac
gagcgtcattacgacaactcgactgatgtcgaggggaccgaggaagacacggcggtcgat
tccgcggaagatgaggacgtcattgagatgacttctagtccgacaaacagcacaaggcgg
agcctaagtggcaagcgcaggggaagaggaaaatggagcaagctaaagggaccttgcact
gcaagcaacccgattgataaatgctggcgttgccagccagattgggccaagcgtcgtaag
aggcttgttcgttgcgtccgtgggtttggttacaggaccacaggaggcaaacgcggtcgc
atctatgttgtcacaagccccagagacgatgatacggtgaaccctagacccggaacacta
cgtcacgctgtgatacaaaaagaaccgctctggatcattttcaagcacgatatgagcatt
aggttaagccaagagctaatgattgctagtcacaagacgatcgatgctcgtggcgctaac
gtgcacatcgcatatggtgccggtatcacgatgcagtacgtgcacaatatcatcattcat
gggcttcacgtccatcacattgtgacaagcagtggcggtttgataagagattcgattgac
cactttgggcaaagaggacaggctgatggagatgggatctctatctttggggcaacaaac
atttggcttgaccacatttctatgtctaaatgccaagatggccttattgacgctattatg
ggctccaccgcaatcaccatctctaactctcatttcacccaccacaacgatgtgatgttg
ctcggtgcacaagaccacaaccaggatgacaagaagatgcaagtcacagtggcttacaac
cattttggtaaaggactcgtacagaggatgcctaggatccgatggggtttcgtccatgtt
gtcaacaatgactacactcattgggagctttacgcgattggaggtagccaaggtcctacc
attctcagccatggaaaccgtttcatcgctcctcctcacaaacaacattacagagaggtg
acaaagagggattatgctccagaagctgaatggaaaaactggaactggagatccgataaa
gactatttcttgaacggagcatatttcagacaatctggaaatcctcatttcaagtgctcg
cactcaaggcaacagatgataaagcctaaacatggtgtggccgtttcaaagcttaccaaa
tacgccggagcattggattgtcgggtcggaaaagcatgctaa
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