Camelina sativa (false flax): 104763871
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Entry
104763871 CDS
T05044
Name
(RefSeq) ubiquitin receptor RAD23c-like
KO
K10839
UV excision repair protein RAD23
Organism
csat
Camelina sativa (false flax)
Pathway
csat03420
Nucleotide excision repair
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104763871
09124 Replication and repair
03420 Nucleotide excision repair
104763871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
csat03051
]
104763871
03400 DNA repair and recombination proteins [BR:
csat03400
]
104763871
Proteasome [BR:
csat03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
104763871
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104763871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
Dsc3_N
CUE
UBA_RAD5A
UBA_3
TECR_N
UBL_UBAC1
Crinkler
Ubiquitin_5
SIP1
Motif
Other DBs
NCBI-GeneID:
104763871
NCBI-ProteinID:
XP_010485565
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Position
19:complement(759600..763226)
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AA seq
419 aa
AA seq
DB search
MKIFVKTLKGTHFEIEVKPEDSVADVKKNIETVQGADVYPAAKLMLIHQGKVLKDEKTIE
ENKVAENSFIVIMMAKSKPASTGASSASAGTPQAKSIPPSTSQPSVSTQTAASVATPVDP
APTRPPPPAPTPLPTPATETVNVPEPVPVAVTEPVPASTPAADSAPVGSQGDIYGQAASN
LAAGSNLDSTIQQILDMGGGTWDRDTVVRALRAAFNNPERAVEYLYSGIPEQAEVPAVFR
APASGGQPANPPAQTQQPAAAPASGPTANPLDLFPQGLPNVGGNPGAGTLDFLRNSQQFQ
ALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNILGQLA
AEMPQPQAIQVTPEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHEFEE
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatttgtgaaaactctcaaggggactcactttgagatcgaagttaaacccgag
gattcggttgctgatgtgaagaagaacatagagactgtacagggtgcggatgtatatcct
gctgcgaaactgatgcttattcaccaaggtaaagttcttaaagatgagaaaacaattgag
gagaacaaagttgctgagaacagttttattgtcattatgatggccaagagtaaacctgct
tcaactggagcatctagtgcatctgctggcacaccgcaggccaagtcaataccaccctca
acatcacagccttcagtttctactcagaccgctgcttctgtagcaacaccagtggaccct
gcaccgacacgtccgccaccacctgcaccgacaccgctgcccacacctgcaactgaaact
gtgaatgtacctgaacctgtgcctgtagctgtaactgaacctgtgcccgcaagcactcct
gcagcagactcggctcctgtgggaagtcaaggtgatatttacggacaagcagcatcaaat
ctagccgctggaagtaatttagacagtaccattcagcaaattcttgacatgggtggagga
acctgggatcgtgacactgttgttcgtgcactccgtgctgcatttaataaccctgaaaga
gctgtggaatatctttactctgggatccctgagcaagctgaagttccagcagttttccgt
gctccagctagtggtggacagccagcaaatcctccagcacagactcagcaacccgcagca
gcacccgcaagtggtcctactgcaaatccgttagatctcttcccacagggcttgccaaat
gttggcggaaatcctggtgccggaacacttgatttcctgcgcaacagccaacagttccaa
gctctgcgagcgatggtgcaagcaaatcctcaagttctgcagcctatgcttcaggaactg
ggaaagcaaaacccaaacttgatgcggttgattcaagatcaccaggctgacttcttacgc
ttaataaatgaacctgttgaaggaggtggtgagagtggcaatatccttggccaattggcg
gcggagatgccacagccacaagcgattcaagtcacacctgaggaacgcgaagcaattgaa
cggcttgaagcaatgggattcgagagagcactagtattggaagtgttctttgcgtgcaac
aagaacgaagagttggctgcaaactatcttttagatcacatgcatgagttcgaggaataa
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