Camelina sativa (false flax): 104764243
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Entry
104764243 CDS
T05044
Name
(RefSeq) syntaxin-43-like
KO
K08489
syntaxin 16
Organism
csat
Camelina sativa (false flax)
Pathway
csat04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
104764243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104764243
Membrane trafficking [BR:
csat04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
104764243
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
FlxA
Prominin
Syntaxin_2
MCPsignal
Amnionless
EF-G-binding_N
ZSWIM1-3_C
Motif
Other DBs
NCBI-GeneID:
104764243
NCBI-ProteinID:
XP_010486043
LinkDB
All DBs
Position
19:2234789..2237038
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AA seq
328 aa
AA seq
DB search
MATRNRTLLFRKYRNTLRSVRAPIGSSTVTANNSLTGAKSGLGPVIEMASTSLLNPNRSY
XAPVSTEDPGNSRGTVTVGLPPDWVDVSEEISVNIQRARIKMAELGKAHAKALMPSFGDD
KEDQHQIESLTQEITFLLKKSEKQLQRLSAAGPSEDSNVRKNVQRSLATDLQNLSMELRK
KQSTYLKRLRLQKEDGTDLEMNLNGNRYKAEDDDFEDMVFSEHQMSKIKKSEEISVEREK
EIQQVVESVNELAQIMKDLSALVIDQGTIVDRIDYNIQNVASTVDDGLKQLQKAERTQRQ
GGMVMCASVLVVLCFIMLVLLILKEILL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaggaatcgtacgttgttgttcaggaagtacagaaacactctgaggagcgtt
cgtgctccgattgggtcgtcgacagtgacggcgaacaattcgttgacgggagctaaatcc
gggttaggtccggtgatcgagatggcgagcacatctctattgaatccgaaccgctcttac
nacgctccagtcagtactgaggatcctgggaactcgagaggtacggtaacagtgggatta
ccaccagattgggttgatgtatctgaggagatttcagttaacattcagcgtgcaagaatc
aaaatggctgaattgggaaaagctcatgcgaaagctttgatgccttcgtttggggatgat
aaagaagatcaacatcaaatcgagtctttgacacaagagattactttcttattgaagaaa
tctgagaagcaacttcagaggctttctgctgctggaccttctgaagattcaaatgttagg
aaaaatgtccagcgatcacttgctactgatctccaaaacctttctatggagcttcgtaag
aaacagtctacatatttgaaacgcttgagactgcaaaaagaggacgggacggatttagaa
atgaatctgaacggaaacagatataaagcagaagatgatgatttcgaggatatggtattt
agtgagcatcaaatgagtaagataaaaaagagtgaggaaatatcggtagagagggagaaa
gagattcaacaggttgttgaatccgtaaatgaacttgctcagatcatgaaggatctatcc
gcgcttgtgatagaccagggtaccatagttgatcggattgactacaatatccagaacgtt
gctagtacagttgacgatggtctcaaacagctgcaaaaggcggaacgtacacagagacaa
ggaggaatggtgatgtgtgcgtcagttcttgtcgtcctctgcttcatcatgctagtactc
ttaatcctaaaggaaattctcttgtga
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