Camelina sativa (false flax): 104764331
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Entry
104764331 CDS
T05044
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104764331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104764331
03036 Chromosome and associated proteins [BR:
csat03036
]
104764331
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
104764331
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
104764331
RSF complex
104764331
WICH complex
104764331
B-WICH complex
104764331
NORC complex
104764331
BRF complex
104764331
NuRF complex (fruit fly)
104764331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
Myb_DNA-binding
HDA2-3
DBINO
CHDII_SANT-like
AAA_14
Motif
Other DBs
NCBI-GeneID:
104764331
NCBI-ProteinID:
XP_010486148
UniProt:
A0ABM0XHP0
LinkDB
All DBs
Position
19:2644757..2650549
Genome browser
AA seq
1056 aa
AA seq
DB search
MARISNSDEAFSSEEEEERVKENEEVEDEEELEAVARSSGSDDDEVAAADESPLSDGEAA
PMEDDYEDEEDEEKAEISKREKARLKEMQKLKKQKIQELLDSQNASIDADMNNKGKGRLK
YLLQQTELFAHFAKGDASSSQKKGKGRGRHASKITEEEEDEEYLKEEEDGLTGSGNTRLL
TQPSCIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGING
PHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRDDLLVAGKFDICVTSFEMA
IKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWAL
LNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKET
ILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPY
TTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGN
TGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDR
AHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMV
RYGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIQFKMDDSADFYDFD
DENKDENKLDFKKIVSDNWNDPPKRERKRNYSESEYFKQTLRQGGPAKPKEPRIPRMPQL
HDFQFFNIQRLTELYEKEVRYLMQTHQKNQLKDTIDVEEPEGGDPLTAEEVEEKEQLLEE
GFSTWSRRDFNTFLRACEKYGRNDIKSIASEMEGKTEEEVERYAKVFKERYKELNDYDRI
IKNIERGEARISRKDEIMKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFMICMIH
KLGYGNWDELKAAFRTSPLFRFDWFVKSRTSQELARRCDTLIRLIEKENQEFDERERQAR
KEKKLAKSATPSKRTVGRQASESPSSTKKRKHLSMR
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggatttcgaattccgatgaggctttctcgtctgaggaggaagaggagcgggtt
aaggaaaacgaagaagtagaagacgaggaggagctcgaggctgttgctcgttcttctggc
tccgacgatgacgaagtagccgccgctgacgaatccccactctccgacggagaagccgcc
cctatggaggatgattacgaggacgaagaagatgaagaaaaagctgaaatcagcaaacgt
gagaaagccaggcttaaggagatgcagaagttgaagaagcagaagattcaggagctgctg
gactcgcaaaatgcttccattgatgctgatatgaacaataagggaaaagggagactgaag
tatcttctgcagcagactgagttatttgcacactttgctaaaggtgatgcatcttcttct
cagaaaaaggggaaaggaaggggtcgtcatgcttccaaaataactgaagaagaggaagat
gaagagtatctaaaggaagaagaggatggcttaactggatctggaaacacacggttgctc
acacagccctcttgtattcaagggaagttaagagattaccagttagctggtttaaactgg
ctcattcggctgtatgagaacggcattaatggaattcttgctgatgaaatgggtctgggg
aagacgcttcagacgatttctttgttggcataccttcatgaatacaggggaatcaatggc
cctcatatggtggttgctccaaaatcaacccttggtaattggatgaacgaaattcgtcgg
ttttgtcctgtcctacgcgctgtgaaattccttggtaatcctgaggagaggagacatatt
cgagacgacctgttagttgctgggaaatttgatatttgcgtcacaagctttgagatggcc
atcaaagaaaagacagcacttcgtcgttttagctggcgttatattatcatcgatgaagcg
catcgaatcaagaatgagaattcacttctttctaaaaccatgagactttttagcaccaat
tatcgacttcttatcacgggaaccccacttcagaataatctccatgaactgtgggctctt
ctcaattttcttctgcctgaggtttttagttcagcagagacttttgatgaatggtttcaa
atttctggcgagaacgatcagcaagaagttgttcaacaacttcacaaggttcttcgacca
tttcttcttcgtagactgaaatcagatgttgagaaaggcctaccaccgaaaaaggagacg
atacttaaagttggcatgtctcagatgcaaaaacaatactacaaggctttattgcagaag
gatcttgaagcagttaatgctggtggagaacgcaaacgtttgctaaacattgcaatgcaa
cttcgaaaatgctgcaatcacccttatctctttcagggtgcagagcctggtcccccttat
accaccggagatcatcttataacaaatgctggtaagatggttctcttggataaattgctt
cctaagctgaaggaacgtgattcgcgggttctgatattttctcagatgacaaggcttttg
gatattcttgaggattatttaatgtatcgcggttatctctattgccgtattgatggaaat
actggtggtgatgaacgagatgcctccatagaagcctacaacaagccaggaagtgagaag
tttgttttcctgttatcgactagagccggagggcttggtatcaatcttgctactgcagat
gttgtgatcctttatgatagtgactggaacccgcaagttgacttgcaagctcaggatcgt
gcccataggattggtcaaaagaaagaagttcaagtgtttcgattctgcactgagtctgct
attgaggagaaagtgattgagagagcttacaagaagttggcgcttgatgccctggtaatt
caacaagggcgattggcagagcagaaaactgtcaacaaggatgagttgcttcaaatggta
agatatggtgctgagatggtgttcagttctaaagatagcacaatcacagacgaggatatt
gatagaatcattgccaaaggagaggaggcaacagctgaacttgatgccaagatgaagaaa
ttcacggaagatgctatacagtttaaaatggatgacagtgctgacttctatgattttgat
gatgaaaataaggatgagaacaagcttgattttaagaaaattgtgagcgacaattggaat
gatccaccaaagcgggagagaaagcgcaactactctgaatctgaatactttaagcaaaca
ttgcggcaaggtggtccagctaaacctaaagagcctagaattccgcgcatgccccagttg
cacgatttccagttcttcaacattcagagattgaccgagttgtatgaaaaggaagtacgt
tatctcatgcaaacacatcagaaaaatcagttgaaagatacaattgatgttgaagaacca
gaaggtggtgatcccttaactgctgaagaagtagaagaaaaggagcaattattggaggag
ggcttctccacatggagtagaagagacttcaatactttccttcgggcttgtgagaagtat
ggccgtaacgacataaaaagcattgcctctgagatggaaggaaaaacagaggaagaagtt
gaaagatatgccaaagtattcaaagagcgatacaaggagctgaacgactatgatagaatc
attaagaacattgagaggggagaggcaagaatctctaggaaagatgaaatcatgaaagcc
ataggaaagaaactggatcgctacagaaacccttggctggaactgaagatacaatatggt
cagaataaagggaagctgtacaatgaagagtgtgaccgtttcatgatctgcatgatccac
aaacttggttatggaaattgggatgagctgaaggcagcattcaggacatcacctttgttc
aggtttgactggtttgtgaaatcccgcacgagtcaggaacttgcaagaagatgcgacact
ctgattcgactgatcgagaaagaaaaccaagagtttgatgaaagagagaggcaggcccgt
aaagaaaagaagctcgcaaagagtgcaacaccatcaaagcgaaccgtaggaagacaagca
agtgagagtccttcatccacgaagaagcgaaagcacctgtcgatgagatga
DBGET
integrated database retrieval system
