Camelina sativa (false flax): 104764367
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Entry
104764367 CDS
T05044
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104764367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104764367
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104764367
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
104764367
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
Motif
Other DBs
NCBI-GeneID:
104764367
NCBI-ProteinID:
XP_019096334
UniProt:
A0ABM1RBE6
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Position
19:complement(2829903..2833036)
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AA seq
631 aa
AA seq
DB search
MDLSGKKIIXXGVLLRAVRYLKLIVPWILVILFNTYCYSLHPLGRESAAEFQNGFWMSPK
SASLCAGLLYNLMIVCFMTTVTLLRMEVGDLNLMRFPDGVHAENLLHLLVLQGPIGEVVK
ILGKYMKILCDWYFVKFIRLFGQPHGLLLFVPQNVPLHEFGVIRRLLFFMDDDAFAGLAI
SVYVPILFVLLPFSIGWIVIATVGGSYLPGNSPVTLGYIIMLSTSFPAIVRWFSLGFHFR
TVILPCLLWVFSVEACKKLFFIKDCFVLYFKIGVLPWVLGCWLEICTSPLFGTTMSQRFE
ILSQFPAMMIIRWWSGIFCLMIAFSYIELIQEIIHKRAYWYLLDVTDPDYKITKLNLEYT
FFVFASHGALLVILFHLPMKAITLISPSFFPLELWVTDEMPFVGVYVVYFNLLPSVSHWL
IELVKPVFRLIIHNWLITVSSWLQLSDFLMVVPPPRREFNDNSWVLLYSIAEGSVVISHN
SQNAEEDIKDQRDDRFLPRIALMLVLAALSLFLFSTAFMALPILLGRVFFDSISFIRIRF
GIKHDDLCAFWIGCHILRRIYISTCFVSDHIQKGRTNLLLGYILIRTRNGLLFSIWISFI
PGLLGLLIDLMIIIPSRVPLNESAVYFLIQD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggacctttctggtaagaaaatcattannnntggagtgttattgagagctgtacgttac
ttgaaattgattgttccttggattcttgtgattctcttcaacacctactgctactccttg
catcctttgggccgagaatctgctgctgagttccagaatggtttttggatgtctcccaag
tcggcttctttgtgtgctggtctgctgtacaaccttatgatcgtgtgttttatgaccact
gtcactcttcttaggatggaggtaggagatctcaatctcatgagatttcctgatggggtt
cacgctgagaatcttcttcacctactagtactacaaggacctattggtgaagttgtcaaa
atcttagggaaatatatgaagatcctttgtgattggtattttgtgaaattcatccgtctc
ttcggccaacctcatggattactactatttgttcctcaaaatgtgccacttcatgaattt
ggggttatccggaggctccttttctttatggatgatgatgcctttgctggtcttgccatc
agcgtctatgtgcctatcctctttgttcttctgccgttttcgattggatggattgtaata
gcaactgttggaggcagctacttacctggaaactcgcctgttactcttggttacataatc
atgctgtcaacttcctttccagccatagtcaggtggttttccctcggatttcacttcaga
acagtgatattgccatgtctcttgtgggttttctcagtagaagcctgcaaaaagctgttt
ttcattaaggattgcttcgtcttgtactttaaaattggtgttctgccttgggtacttgga
tgttggcttgaaatctgcacctcccctttgtttggaaccacaatgtcccagaggtttgag
attctttcacaattcccagccatgatgatcatacgctggtggtcaggaatcttctgtttg
atgatagctttcagttacatagaacttatccaggagatcattcataaacgagcctattgg
tatctcctagatgtcacagatccagactacaagatcaccaaactgaatcttgaatacact
ttctttgtgtttgcgtctcatggggccttgttggtgattttgtttcacttgccaatgaaa
gcaattacacttatcagcccatcatttttccctcttgagttatgggtcaccgacgaaatg
ccttttgttggtgtatacgtagtttatttcaatctactaccatccgtctcccattggtta
atcgaactagttaaaccagttttccgactcataattcacaactggcttatcactgttagt
tcttggcttcagctaagtgatttcttgatggtagtgcctccaccaagaagggagttcaat
gataattcatgggttttattgtattccatagctgaaggctctgtggtcatttcgcataat
tctcagaatgctgaagaagatattaaagaccaaagagatgacaggtttctgccgaggatt
gcactgatgttggtgctagctgctttgagcctgttcctctttagtacagccttcatggct
ttgccaattttgttggggagagtattctttgactctatctcattcatcaggataagattt
ggaatcaaacatgacgatttatgtgctttttggattggatgtcatattctgcgaagaatc
tatatcagcacttgctttgtatctgatcatattcagaagggaagaacgaatttgcttctc
ggatatatcttgatacggacaagaaatggcctgttattctccatctggatctctttcata
ccgggattgcttggtctacttatcgatcttatgatcatcatcccatcacgagtgccacta
aatgaatcagcggtttacttcttgatccaagattag
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