Camelina sativa (false flax): 104764502
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Entry
104764502 CDS
T05044
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104764502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104764502
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104764502
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
104764502
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104764502
NCBI-ProteinID:
XP_010486345
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All DBs
Position
19:3345716..3347956
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AA seq
287 aa
AA seq
DB search
MVGLSIGEQHFVKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVKIGGTDVIASV
KAEIGRPSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGA
GINLSSLLIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVNVSAEVADD
EQPEIDISDEEYLQFDTSSVPVIVTLTKVGMHYIVDATAEEESQMSSAVSISVNRVGHIC
GLTKRGGCGLDPSVILDMISVAKHVTETLMSKLDSEISAAEACEDES
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggtggggctttctattggggagcaacactttgttaaaggtgggattgctcaagatctt
cgaactgatggtcgcaaaagattgacttaccgacctatctatgttgaaactggtgtaatt
ccgcaggctaatggttcagcgagagttaagataggtggaaccgatgtgattgctagtgta
aaggctgaaattgggaggccaagttcgctccaacccgataaaggaaaggttgcagttttc
attgattgcagtccaacagcagaaccgacatttggggggagaggaggtgaggaattgtct
tctgagcttgctttggctcttcaaagatgtcttctgggtgggaaaagtggagcaggagct
ggaataaatttatcttcgcttttaataaaagaaggaaaagtttgctgggacctttatatc
gatggccttgtcattagttcagatgggaatctattggatgccctgggtgctgctattaag
gctgctttaaccaacacggccatcccaaaagtcaatgtttcagctgaagtagcagatgat
gagcaaccagagattgacataagcgacgaagagtatctacaatttgacacttccagtgtt
ccggtcatagtcacgttaacaaaagtgggaatgcattacatagttgatgcaacagcagaa
gaggagtctcagatgagctcagctgtatctatatctgtgaaccgggtaggccatatatgt
gggttaaccaaacgaggcgggtgtggcttagacccgagcgtcatccttgacatgatctct
gtggccaagcatgtgacggagactctaatgagcaaacttgattcagagatttcagctgca
gaggcctgcgaagacgaatcttga
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