Camelina sativa (false flax): 104764510
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Entry
104764510 CDS
T05044
Name
(RefSeq) polygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104764510
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
104764510
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104764510
NCBI-ProteinID:
XP_010486355
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Position
19:complement(3378780..3380439)
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AA seq
396 aa
AA seq
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MGAYFGVSTIFIICLLRISANAEVFTIGSSSGSDITQALLKAFTAACQSPSPSKVVIPKG
EFKLGEIEMRGPCKAPIEVTIQGTVKANGNAIQGKDKWVVFGNINGFKLNGGGAFDGEGN
ASWRVNNCHKTFQCKKLPISIRFDFVLNSEIKDISSIDAKNFHINVLGAKNMTMNNIKII
APEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSL
GRYGHEQDVSGIRIINCTLQQTDNGLRIKTWPSAACSTTASDIHFQDIIVKNVSNPILID
QEYCPWNQCNKQKPSTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGNVDIKYT
GADGPATFQCSNVSPKLLGTQNPKACSAPVTKGPNM
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcatactttggagtttctacaatttttattatctgtttgttgcgaatttcagcc
aatgctgaggtattcaccattggttcatcgtcaggttctgatattactcaggcacttctg
aaagcattcacagcggcatgccaatctccgtccccaagcaaagtggtgatcccaaaagga
gagttcaagcttggtgagatcgagatgaggggtccatgcaaagctccaatcgaggtcacc
attcaaggtactgtcaaagctaacggtaacgctatccaaggaaaggataaatgggtcgtc
ttcggaaacatcaatgggtttaagttgaacggaggtggagccttcgacggtgaaggtaac
gcatcttggagggtcaataactgtcacaagaccttccagtgcaagaaacttcccatcagt
ataaggtttgatttcgtgttgaactctgagatcaaagatatatcctcaattgatgccaag
aacttccacatcaacgtcctgggagcaaagaacatgaccatgaataacatcaagatcatc
gctccagaagatagtcccaacactgatgggatccatttgggaagaagtgacggagtcaag
atccttaactctttcatctccaccggagacgattgcatctccgtcggagatgggatgaag
aaccttcacgtcgagaaagttacatgcggtccgggacacggaattagtgtcggaagcctt
ggaaggtacggacacgagcaagatgttagcggcattaggatcatcaactgtaccctccaa
cagactgacaacggactaaggatcaagacatggccttctgcagcttgttccaccaccgcc
tccgatatccatttccaggatatcattgtcaagaacgtcagcaacccaatcctcattgac
caagagtactgcccttggaaccagtgcaacaagcaaaaaccatcaacgattaagttggtg
aacataagcttcaagaatatcagaggaacatcagggaacaaggacgcggtgaagctactt
tgcagcaagggatatccgtgccagaacgtcgagattggaaacgttgatatcaaatacact
ggagcggatggtccagccactttccagtgctcaaacgtcagccccaagcttttgggaact
cagaaccctaaagcttgcagtgctcccgtgaccaagggacccaatatgtag
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