Camelina sativa (false flax): 104764512
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Entry
104764512 CDS
T05044
Name
(RefSeq) exopolygalacturonase clone GBGA483-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104764512
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
104764512
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104764512
NCBI-ProteinID:
XP_010486357
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Position
19:complement(3398825..3400740)
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AA seq
444 aa
AA seq
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MEGFRITNGLFFIVLVVMATLVADATPLVDKAKDAATSVGDKAKDAATAVGDKVSGAVSG
AVPGGPKASCDVKVLGAKGDGKTDDCAAFAKAWTDVCAAGGTLIVPKGEYLVGSLELKGP
CKGPVTLELNGNLKAPATVAATKPHAGWIEIDNVCDFTLKGNNAILDGQGALAWKVNDCA
KTGKCNSLPINIRLTGLTNSKIMGITSTNSKLFHMNIINCKNLTLENIGIDAPAESLNTD
GIHIGRSNGVNLIGAKIRTGDDCVSIGDGTENLLIENVECGPGHGISIGSLGLYPNEQPV
KGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNIIFEDITMDNVSTPVLIDQEYCPHGKCK
AGVPSQVKLSDVTIKNIKGTSATKVAVKLMCSKGCPCTNIALADINLVHNGKEGPAVSAC
SNIKPVLSGKLVPEACTEVAKPGP
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggagggttttcgtataacaaatgggttgttttttatcgtgctagtggttatggccacc
ttagtagcagacgcaacaccacttgttgataaagcaaaagatgcagctacatcagttggc
gataaagcaaaagatgcagctacggcagttggcgataaagtatctggagcagtatctgga
gcggtacctggtggacctaaagcaagttgcgatgttaaagtattaggagccaaaggagac
gggaaaactgatgattgtgccgcatttgcgaaagcatggacagatgtgtgtgcagcaggg
gggacactgatagtgccaaaaggtgaatatttggtagggagcttagaactcaaaggtcca
tgcaagggtccagtcactttggaattgaatggcaatctaaaggctccagctacggtcgcg
gcaactaaacctcatgcgggatggattgaaattgacaatgtttgtgatttcacgttgaaa
gggaacaatgctattcttgatggtcaaggtgccctcgcttggaaggtcaatgactgcgcc
aaaactggcaaatgcaactctctccccatcaacatccgattaacgggtctaacaaactcg
aaaattatgggcattacgtcaacaaacagcaaacttttccacatgaacatcattaactgc
aagaacttaactcttgagaatattggcattgatgcacctgcagagagtctcaacaccgat
ggtatccacatcggaaggtccaacggtgttaacttaataggggcaaagattagaactgga
gatgactgcgtttccattggagatggtactgaaaatctccttattgagaacgtcgaatgt
ggaccaggacatggtatttccattggaagtcttggattgtatcctaatgagcaaccagtg
aaaggagtcaccgtgaggaaatgccttatcaagaacactgacaatggagttcgcatcaag
acatggcctggatctccccctggtattgcctccaacattattttcgaagatatcacaatg
gacaatgttagcacccccgttctcatcgaccaagagtattgtccacatggaaaatgcaaa
gctggggtaccatctcaagtaaaattgtcggacgtgaccatcaagaacattaagggcaca
tcagcaacaaaggtggctgtgaaactaatgtgcagcaaaggatgtccttgcaccaacatt
gccctcgctgacatcaacttggtccacaatggtaaagaaggaccagctgtctcggcctgt
tctaacattaagcctgttctcagcggaaagttggttccagaagcttgcactgaagtcgct
aaaccgggtccttaa
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