Camelina sativa (false flax): 104764652
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Entry
104764652 CDS
T05044
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104764652
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104764652
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104764652
NCBI-ProteinID:
XP_010486527
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Position
19:complement(3973378..3975444)
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AA seq
364 aa
AA seq
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MGNLHGLHRSHHGGETPNTPFPPPYTAAPSPAPPSNHQMTVGPYCHVDSSLRSLAGKAEG
FGCAAVGGLNGPICRVTSLADEGPGSLREACKRPEPLWIVFDVSGTINLSSFVSVSSHKT
VDGRGQRVKITGKGLRLKECENVIICNLEFEGGVGPDEDAIQIKPKSHNIWIDRCSLKNY
YDGLIDITRESTDITVSRCHFMNHDKTILIGADTSHVTDRCIRVTIHHCFFDGTRQRHPR
VRFARVHLFNNYTRHWSIYAVGAGVESQIYSQCNIYEASEKKTVFKYITEKAADKEKPGA
GFVRSEGDLLLNGAKSCLSQDGGHRHVFSPTQHYSEWTVESPSEKLKNYLKHSTGLQNLP
LPLD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacttacacggccttcacagatcccatcacggcggcgaaacccccaacacccct
ttcccaccaccatatacagccgctccatcgccagctccaccatcgaatcaccaaatgacg
gtgggaccttattgccacgtagactccagcctccgctctctcgccggaaaggccgagggt
ttcggctgcgcggccgttggtggtcttaatggtccgatttgccgcgtcacttctttagct
gacgagggtccaggatcgttacgagaggcttgcaagaggccagaaccgttatggattgta
ttcgatgtgtctggaacgatcaatctttcttcgtttgtgagcgtatcatcgcacaaaacg
gtggacggaagaggccaaagagtgaagattacgggaaaagggttaaggctaaaagagtgt
gaaaacgttatcatctgcaatcttgaatttgaaggcggtgtaggtccagacgaagacgct
attcagatcaaaccaaaatcacacaacatttggattgatcgttgtagtctcaagaattac
tatgatggtttgattgatatcactcgagaaagcaccgacattaccgtctcaagatgtcat
ttcatgaaccacgacaagacgatattgattggagcggacacaagtcacgtgacggaccga
tgcataagagttaccatacatcactgtttctttgacggtacacgtcagcgacaccctcgc
gttcgctttgcaagagtccatctcttcaacaactacactcgtcactggtccatttacgcc
gttggggccggtgtcgaatctcagatatattctcagtgcaacatatatgaagctagtgag
aagaagactgtctttaagtacatcactgagaaggctgcggataaagagaaacctggagct
ggcttcgtaagatcggaaggggatttgttgttgaacggagccaagtcttgtcttagccag
gacggtggacatcgccacgtgttctctccgacccaacactattctgaatggaccgtcgaa
tctcctagcgaaaaactcaagaactatctgaaacattcgaccggcttgcagaaccttcct
ctcccactagactaa
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