Camelina sativa (false flax): 104764681
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Entry
104764681 CDS
T05044
Name
(RefSeq) cell division control protein 48 homolog A
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
csat
Camelina sativa (false flax)
Pathway
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104764681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104764681
03009 Ribosome biogenesis [BR:
csat03009
]
104764681
04131 Membrane trafficking [BR:
csat04131
]
104764681
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104764681
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
104764681
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104764681
Membrane trafficking [BR:
csat04131
]
SNARE
SNARE associated proteins
Others
104764681
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104764681
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104764681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_22
AAA_14
AAA_33
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
Vps4_C
ABC_tran
Viral_helicase1
AAA_7
NACHT
NB-ARC
TsaE
AAA_lid_PRS2_C
AAA_24
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
104764681
NCBI-ProteinID:
XP_010486558
LinkDB
All DBs
Position
19:4069995..4073695
Genome browser
AA seq
809 aa
AA seq
DB search
MSTPAESSDSKSKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGDT
ILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHI
LPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVV
APDTEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTE
AALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWN
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSGGGGDGGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNI
FKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSEN
PEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFEN
STGSGATTGVADPFVTSAAAAADDDDLYN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccccagctgaatcttcagactcgaaatcgaagaaagatttcagtactgctatt
ctcgagaggaagaagtctcctaaccgtcttgtcgtcgatgaggctatcaacgatgataac
tccgtcgtctctcttcaccctgctaccatggagaagcttcagctcttccgtggtgatact
attctcatcaagggtaagaaaagaaaggacactgtctgcattgctcttgctgatgaaaca
tgtgaggagccaaagatccggatgaacaaagttgtcagatctaacttgagggttagactc
ggagatgttatttctgttcaccaatgcccagatgtcaagtacggaaaacgtgttcacatc
ttgcctgttgatgataccgttgaaggggtgactggcaacctctttgatgcttacttgaaa
ccttatttccttgaggcataccgccccgtgaggaagggtgatctcttcctagtcagagga
ggaatgaggagtgtggagttcaaagttatagagaccgatcctgctgaatactgtgtggtt
gctccagacacagagattttctgtgagggtgagcctgtgaagagagaggatgaagaaagg
ctagatgatgtaggttatgatgatgttggtggtgtcagaaaacagatggctcagatcagg
gaacttgttgaacttccattgaggcatccacaactattcaagtccattggtgttaagcca
ccaaagggaatcctgctctatggacctcctgggtctggaaagactttgattgctcgggct
gtggctaatgaaactggtgccttcttcttttgtatcaatggaccagagatcatgtctaaa
ctggctggtgagagtgagagcaacctgaggaaagcatttgaggaggctgagaaaaacgcg
ccttcgatcatcttcattgatgagattgactctatagcaccaaaaagagagaagacaaat
ggagaggttgagaggaggattgtgtctcagctccttacactcatggatggactcaaatcg
cgtgctcatgttattgtcatgggagcaaccaatcgtcccaacagtattgacccagctctt
agaaggtttggaagatttgatagggagatcgatatcggtgttcctgacgaaattggacgt
cttgaagtgctcaggatccatacaaagaacatgaagcttgctgaagatgtggatctcgaa
aggatctcaaaggacacacatggttacgttggtgctgatcttgcagctctgtgcacagag
gctgccttgcaatgcatcagggagaagatggatgtgattgatttggaagatgactccata
gatgctgaaatcctcaattccatggcagtgaccaacgagcacttccacactgctctcggg
aacagcaacccatctgcacttcgtgaaaccgttgttgaggttcccaatgtctcatggaat
gatatcggaggtcttgagaatgttaagagagagctccaggagactgttcaatacccagtc
gagcacccagagaaatttgagaaattcggtatgtctccatcaaagggagtccttttctac
ggtcctccaggatgtgggaaaaccctattggccaaagctattgccaacgagtgccaagct
aacttcatcagtgtcaaaggtcctgagcttctgaccatgtggtttggagaaagtgaagca
aatgtccgagaaatctttgacaaggcccgtcaatccgctccatgtgttctcttctttgat
gaactcgactccattgcgactcagagaggaagcggaggcggtggcgatggaggcggtgct
gcagatagagtgttgaaccagcttttgactgagatggatggaatgaatgccaagaaaacc
gttttcatcatcggagcaaccaacagaccagacattattgattcagctcttcttcgtcct
ggaaggctcgaccagctcatttacattccactaccagacgaggattcccgtctcaatatc
ttcaaggccgccttgaggaaatctcctattgctaaagatgtagacatcggtgcacttgct
aaatacacacagggattcagtggtgctgatatcactgagatttgccagagagcttgcaag
tacgccatcagagagaacattgagaaggacattgaaaaggagaagaggaggagcgagaac
ccagaggctatggaggaagatggtgtggatgaagtatcagagatcaaagctgcacacttt
gaggagtctatgaagtatgctcgtaggagtgtaagtgatgcagacatcaggaagtaccaa
gcctttgctcagactttgcagcagtctagagggttcggttctgaattcaggttcgagaat
tctactggttcaggtgctaccactggagtcgcggatccgtttgtcacgtctgcggccgct
gctgcggatgatgatgatctctacaactag
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