Camelina sativa (false flax): 104764820
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Entry
104764820 CDS
T05044
Name
(RefSeq) prolycopene isomerase, chloroplastic-like isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00906
Carotenoid biosynthesis
csat01100
Metabolic pathways
csat01110
Biosynthesis of secondary metabolites
Module
csat_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
104764820
Enzymes [BR:
csat01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
104764820
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
Thi4
GIDA
GDI
HI0933_like
Pyr_redox_2
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
104764820
NCBI-ProteinID:
XP_010486730
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Position
3:complement(2803674..2807060)
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AA seq
602 aa
AA seq
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MNLCFQNPVERAHPSSLFFFSPLKTSNKLGSSSNLGFHVRFFENRKKKMKKSPMVMVKSV
SSSSSSIAVEGTKRDETSTRESVYDAIVIGSGIGGLVAATQLAVKEAKVLVLEKYLIPGG
SSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALKAVGRKMEVIPDPTTVHFHLPNDDL
SVRIHREYDDFITELTSKFPHEKEGILGFYGDCWKIFNSLNSLELKSLEEPIYLFGQFFQ
KPLECLTLASYLPQNAGAIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDR
HYGGINYPVGGVGGIAKSLAEGLVDHGSDILYKANVKSIILDDGKAVGVRLADGREFFAK
TIISNATRWDTFGKLLKGEKLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFV
LEDNWKNLEEPYGSIFLSIPTILDPSLAPDGRHILHIFTTSSIEDWEGLPPKEYEAKKEE
VAAEIIQRLEKKLFPGLSSSITFKEVGTPRTHRRYLARDKGTYGPMPRGTPKGLLGMPFN
TTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGIEKKSRVLDVGLLGILGWLRT
LA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtgttttcaaaatcccgtagagcgtgctcatcctagttccttgttcttcttc
tctccgttgaagacctcgaataagctgggttcttcttccaatttagggtttcatgttcga
ttttttgagaatcggaagaagaagatgaagaaatcacctatggttatggtgaaatccgtt
tcttcttcttcttcttcaattgcggttgaagggacgaagagagacgaaacaagtacgaga
gagagtgtgtacgacgccattgtcatcggctctgggattggaggactggtcgctgccact
cagctagctgtcaaagaagctaaggttttagttctggagaagtatttgattcctggtggg
agctctggctattacgaaagagatgggtatacatttgatgttggctcttctgtcatgttt
ggtttcagcgataaggggaatcttaacttgataactcaggcgttgaaggctgttggccgt
aagatggaggttatacctgatcctaccactgtccatttccatcttcccaatgatgatctt
tcagttaggattcatagagaatacgatgatttcatcactgaacttaccagcaagtttccc
cacgaaaaggaagggatccttggtttctatggcgactgctggaagatcttcaactcattg
aactctctggaattaaagtcactagaagagcctatctacctttttggacagttctttcag
aaaccgcttgaatgcttgacactcgcttcttacttgcctcaaaatgctggggctatagct
cggaagtacataaaggatcctcagttattgtctttcattgatgcggagtgtttcattgtg
agtacagtcaatgctctacagacgccgatgatcaatgcaagtatggttttatgtgacagg
cactatggaggaattaactacccggttggtggcgttggtgggattgccaagtctttggca
gaaggacttgttgatcacggaagtgatatactctacaaggccaatgtaaaaagcataata
cttgatgatggaaaggctgtcggtgttaggctagcagatggaagagaatttttcgccaaa
acaataatttcaaatgctacaagatgggatacatttgggaaacttttaaaaggagaaaag
cttccgaaagaagaagaaaatttccagaaagtctatgtcaaggctccatcatttctttca
atccacatgggtgttaaagcagaggttctccctccagatacagattgccatcattttgtg
cttgaggacaactggaagaatctggaggagccttatggtagtattttcctcagcattcca
accattcttgatccatctttggctccagatggtcgacatatacttcacatatttacaact
tcctcaattgaggattgggagggactccctccaaaagagtatgaagcgaaaaaggaagaa
gtggctgctgaaataatacagaggctagagaaaaaactgtttccagggctcagttcatct
attacgtttaaggaggtgggaacaccaagaacacacagacgatatcttgctagggataag
ggaacttatgggccaatgcctagaggaaccccaaaaggtttattaggcatgccgttcaat
acaacggctatcgatggtctatactgtgtgggggatagttgctttcctggtcagggagta
atagctgtggcattctcaggagtaatgtgtgctcatcgggtagctgctgatattggcatt
gagaagaaatcacgggtacttgatgttggccttcttggtatacttggttggctaaggaca
ctcgcataa
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