Camelina sativa (false flax): 104764859
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Entry
104764859 CDS
T05044
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
csat
Camelina sativa (false flax)
Pathway
csat04142
Lysosome
csat04144
Endocytosis
csat05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104764859
04142 Lysosome
104764859
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104764859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104764859
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104764859
Membrane trafficking [BR:
csat04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104764859
Exosome [BR:
csat04147
]
Exosomal proteins
Proteins found in most exosomes
104764859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
104764859
NCBI-ProteinID:
XP_010486756
LinkDB
All DBs
Position
19:complement(4972299..4981868)
Genome browser
AA seq
1702 aa
AA seq
DB search
MAAANAPIIMKEVLTLPSIGINQQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTTQDHLQIFNIEAKAKLKSHQMPEQVAFWKWI
TPKMLGLVTQTSVYHWSIEGDSEPVKMFDRTANLSNNQIINYKCSPNEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSILISFASKSFNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQVPHKFHLIYVITKLGLLFVYDL
ETASAIYRNRISPDPIFLTSEASAAGGFYAINRRGQVLLATVNEATIIPFISGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKDAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYIQSLKHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSSEWAMECMKDLLLVNLRGNLQIIVQACKEYCEQLGVESCIKLFEQFK
SYEGLYFFLGSYLSMSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSKVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY
VVERMDGDLWEKVLTEENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVDAQLYE
EAFAIFKKFNLNVQAVNVLLDNVRSIERAVEFAFRVEEDSVWSQVAKAQLRDGLVSDAIE
SFIRADDATQFLEVIRASEDTNVYDDLVRYLLMVRQKVKEPKVDSELIYAYAKIERLGEI
EEFILMPNVANLQNVGDRLYDEALYEAAKIIYAFISNWAKLAVTLVKLQQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQSRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYI
QYDEFDNAATTVMNHSPEAWEHMQFKDIVAKVANVELYYKAVHFYLQEHPDIINDLLNVL
ALRLDHTRVVDIMRKAGHLRLIKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDSFDQIGLAQKIEKHELVEMRRVAAYIYKKAGRWKQSIALSKKDNMYKDCMETASQSGD
HDLAEQLLVYFIEQGKKECFATCLFVCYDLIRPDVALELAWINNMIDFAFPYLLQFIREY
SGKVDELIKDKLEAQKEVKAKEQEEKDVMSQQNMYAQLLPLALPAPPMPGMGGGGYGPPP
PMGGMPGMPPMPPYGMPPMGGY
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagctaacgcccccatcatcatgaaggaggtcctaacgcttccgagcattggg
atcaaccaacaattcatcacgtttacaaatgttactatggagtctgacaagtacatttgt
gtacgggagacggcaccgcagaacagtgttgttattatcgatatgaatatgccgatgcag
cctttaaggagacctataactgctgattctgctcttatgaatccaaactctaggatcctt
gccttaaaagctcaagtcccaggaactactcaggatcatctacaaatatttaacatcgaa
gcaaaagcaaagttgaaatcacatcagatgcctgagcaggttgctttttggaagtggatc
acaccaaagatgctggggctggtcacacaaacttctgtttatcattggtcgattgaaggt
gattctgagccagttaagatgtttgacagaacggccaatttgtcaaacaatcaaattata
aactataagtgctctcctaatgagaagtggttggtcttgattggaattgctcctggctct
cctgagagaccacaactggtcaagggaaatatgcagcttttctctgtggatcaacaacgg
agccaggcccttgaagcacatgctgcgtcatttgcgcagtttaaggtccctgggaatgaa
aatccttctattcttatatcctttgcaagcaagagctttaatgctgggcagataacatca
aagttgcatgtcattgagcttggtgcccaaccaggaaaaccatcatttactaaaaagcag
gcagatctctttttccctccagattttgctgatgattttcctgtggccatgcaggtccct
cacaagtttcacttgatatatgtcatcaccaagcttggcctgctgtttgtgtatgatcta
gagacggcttctgctatctatagaaatcggattagtccggaccccattttcttaacatct
gaagcttccgcagctgggggtttctatgccattaataggcgaggacaagttcttttggca
acagtaaatgaggccaccataataccttttattagtggtcaattgaacaatttggagctt
gctgtcaatcttgctaagagaggaaacctccctggtgcagaaaatctggttgtccagcgg
ttccaagagttatttgctcaaacaaagtacaaggatgctgcggagcttgctgccgaatct
cctcagggtattctacggacacctgatacggtggctaaattccagagtgttcctgtacaa
gcagggcaaactcctccattgttacagtattttgggacccttttgactagagggaagctc
aatgcatatgagtctttggaactatctcggcttgttgtgaatcaaaacaagaagaacctc
ttggaaaactggttggctgaggataagttagaatgcagtgaagaactcggagaccttgtc
aagactgtggataatgaccttgccctaaaaatatacatcaaagctagagctactccaaaa
gtcgttgcagcttttgcagagcgaagggagtttgacaagatactgatttattcaaagcag
gttgggtacacacctgattacatgtttcttctgcaaacaatactccgtacggatcctcag
ggagcagtaaattttgctttaatgatgtcccaaatggaaggaggttgtccagttgactac
aacactatcactgatcttttccttcagagaaatttgatccgtgaagcgactgcgttcctt
ctagatgttctgaagccaaatttacctgagcatgcttttctgcaaactaaggttttggag
atcaatttggtaacctttcctaatgtggctgatgcaatcttagcaaatgggatgttcagc
cattatgaccggcctcgtgttgctcagctttgtgaaaaggctggactttacatccaatcc
ttaaagcattactcagagttacctgatatcaaacgtgtaattgtgaacacacatgctatt
gagccacaggctcttgttgagtttttcggtactctttctagcgagtgggctatggagtgc
atgaaagatcttctgctggtcaacctgagaggcaaccttcagataatcgttcaggcttgc
aaggagtactgtgagcaacttggtgttgaatcatgcattaaactctttgagcaatttaag
tcatacgaagggctgtactttttcctaggttcatatttgagtatgagtgaggatcctgag
attcacttcaagtacattgaagcagctgccaagactggtcaaataaaggaggttgagcgt
gtgactagagagtctaacttttatgatgctgaaaagacgaagaactttttgatggaagct
aagcttcctgatgccagacctttgataaatgtctgtgatcgtttcggctttgtgcctgat
cttactcattacctctacacaaacaacatgctgcgttatattgaaggttacgttcagaag
gtgaatcctgggaatgctcccttagttgtggggcagttgcttgatgacgaatgtcctgaa
gattttataaaaggcctcattctttctgttcgttcattacttcccgttgaaccccttgtc
gaggaatgtgaaaagagaaatcgactccggctcctcactcagttcttagagcatctagtt
agtgagggaagccaagatgtgcatgtccataatgccttgggtaaaattatcatagacagt
aataacaatcctgagcatttcctgaccaccaatccttactacgactctaaggttgtgggt
aagtactgcgagaaacgtgatcccactctggctgttgtggcatacagacgaggacaatgt
gatgaggaactcatcaatgtcaccaacaagaactctttgttcaagttacaagccaggtac
gtagtggagaggatggatggtgacctctgggagaaggttcttacggaagaaaatgaatat
aggaggcaacttattgaccaagttgtgtctactgctttaccagaaagcaagagcccagag
caagtttctgcagctgttaaagcattcatgactgctgatctgccgcatgagcttattgag
cttcttgaaaaaattgtgcttcaaaattctgccttcagtggaaatttcaatctgcaaaat
ctgcttatactgacagctattaaggcagatccgtctagagttatggattacattaacagg
ctggataattttgatggtccagctgttggagaagtggcggttgatgcgcaattgtacgag
gaagcatttgcgattttcaagaagtttaacttaaatgttcaggctgtcaatgtattgttg
gataatgtcagaagcattgaacgtgctgttgaatttgctttccgggtcgaagaagattct
gtttggagtcaagtggctaaggctcagctcagggatggactagtcagtgatgctattgag
tcctttatccgagctgatgatgccactcagttcctggaggtcatccgtgcctctgaagat
actaatgtctatgatgacttggtcagataccttttgatggttagacagaaggtgaaggaa
cccaaggtggatagcgagctcatctatgcttatgcaaagattgaaaggttgggtgagatt
gaagaatttattctgatgcccaacgttgctaaccttcaaaatgttggtgaccgcttgtat
gacgaagctctgtatgaggctgcaaagataatttatgcattcatatcgaattgggccaag
ctagccgtcacacttgtgaagttgcaacagttccaaggtgctgttgatgctgcaaggaaa
gcaaacagtgcaaagacatggaaggaagtctgctttgcttgtgttgatgctgaggaattc
cgacttgctcaaatctgtggacttaacattatcatacaggtggatgacctggaagaagtg
agcgagtactaccagagcagaggatgcttcaatgaattgatctcgcttatggagagtgga
cttggtctggaacgtgcgcacatggggatcttcaccgagttgggtgtactgtacgccaga
tatcgttatgaaaagcttatggaacacatcaaattgttctcaactcgcctcaatattccc
aagcttatccgcgcctgtgatgaacaacagcattggcaggaacttacctatctttacatt
caatatgatgagtttgataatgctgcaaccactgtcatgaaccattctcctgaagcatgg
gagcacatgcaattcaaagacatcgttgccaaggttgcaaatgttgagctttactataag
gccgttcacttctacttgcaagagcatcctgatataatcaacgatcttctcaatgtgctt
gctctgcggttagatcacacgcgtgtcgttgatattatgcgcaaggctggtcacttgcgc
cttattaaaccatacatggttgcagttcagagcaacaatgtctctgctgtaaatgaagct
ctgaatgagatatacgtagaagaagaagactatgacaggttgcgcgagtctatcgatttg
catgacagttttgaccagataggtctcgctcagaagattgagaaacacgagcttgtcgaa
atgagacgtgtggctgcttatatctacaagaaagctggtagatggaagcaatcgattgct
ttgtcaaagaaagataacatgtacaaggactgtatggaaactgcttcacaatctggcgac
catgatcttgcggaacaacttctcgtctacttcattgaacaggggaaaaaggaatgcttt
gctacatgtctctttgtctgttatgacttaatccgaccagacgttgctctcgaactcgct
tggatcaacaatatgatcgactttgccttcccgtatctcctccagtttatccgagaatac
tctggcaaagtggatgagctaatcaaggacaagctggaggcacaaaaagaggtgaaggcc
aaagaacaggaagagaaggatgtcatgtcccaacagaacatgtacgcccaattattgcca
cttgctttacccgcaccaccgatgccaggaatgggaggtggtgggtatggtccgccacca
ccaatgggcggaatgccaggaatgcctccaatgccaccatatggaatgccaccgatgggt
ggttactaa
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integrated database retrieval system