Camelina sativa (false flax): 104765024
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Entry
104765024 CDS
T05044
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
csat04141
Protein processing in endoplasmic reticulum
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104765024
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104765024
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104765024
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104765024
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104765024
03009 Ribosome biogenesis [BR:
csat03009
]
104765024
03110 Chaperones and folding catalysts [BR:
csat03110
]
104765024
04131 Membrane trafficking [BR:
csat04131
]
104765024
03051 Proteasome [BR:
csat03051
]
104765024
03029 Mitochondrial biogenesis [BR:
csat03029
]
104765024
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104765024
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
104765024
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19 complex
104765024
Complex C
Prp19-CDC5 complex
104765024
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104765024
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP70 / DNAK
104765024
Membrane trafficking [BR:
csat04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
104765024
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
104765024
Proteasome [BR:
csat03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
104765024
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
104765024
Exosome [BR:
csat04147
]
Exosomal proteins
Proteins found in most exosomes
104765024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DACNG
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
104765024
NCBI-ProteinID:
XP_010486980
LinkDB
All DBs
Position
19:complement(5692896..5695286)
Genome browser
AA seq
650 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
QVAMNPTNTVFDAKRLIGRRYSDPSVQSDLKHWPFTVKSGPAEKPMITVNYKGEEKQFSA
EEISSMVLIKMREIAEAFLGSPVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP
TAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKNSVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKK
KVDAKNALENYAYNMRNTIKDDKIASKLDAADKKKIEDAIDQAIEWLDGNQLAEADEFED
KMKELESLCNPIIAKMYQGAGPDMGGAGAMDDDAPAGGSGGAGPKIEEVD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtaaaggtgaaggtccagctatcggtatcgatctcggtactacctactcttgc
gtcggtgtttggcaacacgaccgcgtcgaaatcatcgccaacgatcaaggaaaccgtacc
actccttcctacgttgctttcactgactccgagcgtctcatcggtgatgccgctaagaat
caagtcgccatgaaccctaccaacaccgtcttcgatgctaagcgtctgattgggagaaga
tacagtgatccgtcggttcaatcggatttaaagcactggccattcacggttaaatccggt
ccagctgagaagcctatgatcacggtcaactacaagggagaggagaaacagttctctgcc
gaggagatctcctctatggttctcattaagatgcgggagattgctgaagctttccttggc
tctcctgttaagaacgctgttgttaccgtacctgcttatttcaacgactctcagcgtcag
gcgactaaggacgctggtgttatctctggtctcaacgtgatgcgtatcatcaacgagcca
accgctgcggcgattgcttacggtcttgacaagaaggcgtcgagtgttggagagaagaat
gttttgatctttgatttgggaggtggtacttttgatgtttctttgcttacgattgaggaa
ggtatctttgaagtcaaggccactgctggtgacacgcatcttggtggtgaggactttgac
aacaggatggttaatcattttgttcaggagtttaagaggaagaacaagaaggatatcact
ggtaacccaagggctttgaggaggcttagaacagcttgtgagcgggccaagaggactctt
tcttcgactgctcagacgactattgaaatcgactctttgtacgagggtattgatttctac
actaccatcactcgtgctagattcgaggagctcaacatggatttgttcaggaagtgtatg
gagccagtggagaagtgtttgagagatgctaagatggacaagaacagtgtccatgatgtt
gtccttgttggtggctctacaagaatccctaaagtgcagcagcttttgcaagactttttc
aatgggaaagagctttgtaaaagcattaacccggatgaggctgttgcttatggagctgct
gttcaagctgcgatcttgagcggtgaagggaacgagaaggtccaagacttgttacttctt
gatgtcactcctctgtccttgggtttggaaaccgccggtggggttatgactgtcctgatt
ccgaggaacacaactattccgacgaagaaagagcaggtgttctctacctattcagacaac
cagcccggtgttctgatccaggtctatgaaggggagagagcaaggacaaaggacaacaac
cttttgggaaagttcgagctcagcggtataccacctgctccacgaggtgttccccaaatt
acagtctgtttcgacatcgacgccaatggtatcctgaacgtgtcggctgaggacaagacg
actggtcaaaagaacaagatcacaatcacaaacgacaagggaaggttatcaaaggaagag
atcgagaagatggtacaagaagcagagaagtacaaggctgaggatgaagaacacaagaag
aaggttgatgcaaagaacgctctggagaactatgcatacaacatgaggaacacgatcaag
gacgataagatagcatctaagctggatgcagctgataagaagaagattgaggatgcgatc
gaccaagctattgagtggttggatggtaatcagctggcggaggcagatgagttcgaggat
aagatgaaggagctcgagtctctttgcaacccaatcattgctaagatgtaccaaggtgct
gggcctgatatgggtggtgctggagcaatggacgatgatgctccggctggtggtagcggc
ggtgctggccctaagattgaagaagttgattaa
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