Camelina sativa (false flax): 104765133
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Entry
104765133 CDS
T05044
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104765133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104765133
03110 Chaperones and folding catalysts [BR:
csat03110
]
104765133
03029 Mitochondrial biogenesis [BR:
csat03029
]
104765133
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104765133
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104765133
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104765133
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP60 / Chaperonin
104765133
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104765133
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104765133
Exosomal proteins of other body fluids (saliva and urine)
104765133
Exosomal proteins of breast cancer cells
104765133
Exosomal proteins of colorectal cancer cells
104765133
Exosomal proteins of bladder cancer cells
104765133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
104765133
NCBI-ProteinID:
XP_010487110
LinkDB
All DBs
Position
19:6208589..6212123
Genome browser
AA seq
596 aa
AA seq
DB search
MASTFTATSSLSSLVAPNAIKLSSAASISSSSFGRRQNLCLRKSRPAIVCAAKDLHFNKD
GTTIRRLQSGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI
GAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVN
ELKLMSKEVEDSELADVAAVSAGNNHEVGSMIAEAMSKVGRKGVVTLEEGKSAENNLYVV
EGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKITNARDLVGILEDAIRGGYPILII
AEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLD
KAGKEVLGNASKVVLTKEMTTIVGDGTTQEAVNKRVVQIRNLIEQAEQDYEKEKLNERIA
KLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLIRLASKVDAIK
NTLENDEEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNVKFGYNAATGKYED
LMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIPEPEPVPAGNPMDNSGYGY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgacgttcactgccacgtcttcccttagttcgttggtagctcctaatgctatc
aagttgtcttctgcggcttctatttcttcaagctcttttggaaggagacagaatctgtgc
ctgagaaagtcccgtcctgcgattgtatgtgccgccaaggacttgcatttcaacaaggat
gggactaccataaggagacttcaaagcggtgttaacaagcttgcggaccttgttggtgtc
acacttggaccaaaagggagaaatgttgttcttgagagcaagtatggatccccaagaatt
gttaatgatggtgtcactgttgctagggaggtcgagttggaggaccctgttgagaacatt
ggtgcaaagcttgtaaggcaagcagctgcaaagaccaatgacttggctggtgacggtaca
acaacatctgttgttctagcgcaaggttttattgctgagggtgtcaaggtggtggctgcg
ggtgcaaaccctgtattgatcactagaggcattgagaaaacagctaaggctttggttaac
gagctgaaactaatgtctaaggaggttgaagacagtgaactcgctgatgtggcagctgtt
agtgctggtaataaccatgaagtcggaagtatgattgctgaagcaatgagcaaagtgggc
aggaagggtgtggttaccctggaggagggtaaaagcgctgagaacaacctttacgttgtg
gaaggaatgcaatttgaccgtggttatatctccccatactttgtgacagacagtgagaaa
atgtctgttgagtacgataattgcaagttgcttcttgttgacaagaaaattaccaatgca
agggatcttgttggtattctagaggatgcgattaggggcggatacccaatccttataatt
gcagaagatattgaacaagaagctttagctactcttgttgttaacaagcttagaggcaca
ttgaagattgcagctctcaaagctcctggatttggagagcgcaagagccagtaccttgac
gatattgccattctaactggaggaactgtgataagagaggaagttggtctttctcttgac
aaagctggaaaagaagttctgggtaacgcttctaaggttgtcctgacaaaggaaatgaca
acgattgtaggtgatgggaccacacaggaagcagtgaacaaacgtgttgtacagattagg
aatctgattgagcaagcggagcaagactacgagaaggagaaattaaacgagagaattgca
aaactctctggtggagttgctgtaattcaggttggagctcaaactgagacggagcttaaa
gaaaagaagctgagagtggaagatgctcttaatgctacaaaggctgctgttgaggaaggt
attgtcgtcggtggtggttgcactctgatccggcttgcatccaaggtcgatgccatcaag
aatacccttgaaaatgatgaagaaaaggttggagcggaaatcgttaaaagagcactgagt
taccctctgaaattgatagccaagaatgcgggtgtcaatggaagtgttgtcagcgagaag
gtactagctaatgataatgtgaaatttggttacaatgctgcaacgggcaagtatgaagac
ctgatggctgcaggcatcatcgacccaacaaaggttgtgagatgttgcttagaacatgca
gcctcggttgcaaaaactttcctgatgtctgactgtgtggttgttgagatcccagagcca
gagccagttcctgctggcaaccccatggacaactcaggatatggatactaa
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