Camelina sativa (false flax): 104765391
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Entry
104765391 CDS
T05044
Name
(RefSeq) zinc finger CCCH domain-containing protein 4
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104765391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104765391
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19-related factors
104765391
Complex C
104765391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_2
RRM_occluded
RRM_3
zf-CCCH_10
zf-CCCH_3
zf-CCCH
zf-CCCH_4
RRM_YTH1
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
104765391
NCBI-ProteinID:
XP_010487392
UniProt:
A0ABM0XKQ3
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All DBs
Position
3:complement(3024368..3026791)
Genome browser
AA seq
484 aa
AA seq
DB search
MAHRILRDHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGR
DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREYFAE
EHDRKTRAGLDYESSFGKMRPNDTILKLQRTTPYYKRNRAHVCSFFIRGECTRGAECPYR
HEMPETGELSQQNIKDRYYGVNDPVAMKLLGKAGEMGTLESPEDESIKTLYVGGLNSRIL
EQDIRDQFYAYGEIESIRILADKACAFVTYTSREGAEKAAQELANRLVVNGQRLKLTWGR
PRPEQDGSNQQGSVAHSGLLPRAVISQQHNQPPPMQQYYMQPPPANQDKPYYPSMDPQRM
GAVISNQEAGGSSTIDNSGASSSSYVMPPHQSYPPAPYGYMPPPYQQQYPPNHHHHPGPM
QHYAPPPAAYPYPQQPGPGSRPAPSPAAVSAPSPDSAPAGSAGAPSGSSQQPPAAASTAT
GSSQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctcacaggatacttagagatcatgaagccgatggatgggaacgctccgatttccca
atcatctgcgaatcttgtctcggtgacaacccctacgtgcgaatgactaaagcgaattac
gataaggagtgcaagatatgtacaagacctttcacggtgtttaggtggagacctggccgg
gatgctagatacaagaagaccgaaatttgtcagacttgttgcaagctgaaaaatgtgtgc
caagtttgtcttttggatcttgagtatggtcttccagtccaggtcagggacacagcactc
aacattagtactcatgactctatccctaaaagtgatgtcaacagagagtactttgctgaa
gaacacgacaggaagactagggctggactggattatgaatcctcattcgggaagatgcga
cctaatgatactattttaaagcttcaaagaacaacgccatactataaaaggaaccgagca
catgtttgtagtttcttcatcaggggtgagtgtacaagaggtgctgaatgtccataccgg
catgagatgcctgaaacaggagagctatcccagcaaaacattaaagaccgttattatggt
gttaatgatccagttgctatgaagttacttggaaaagccggtgagatgggcactttggaa
tcaccagaggatgaaagcatcaaaacgctttacgtcggtggactgaactcaagaatcctg
gagcaagacatacgagaccaattttacgcctatggagaaatcgaatctatcagaattttg
gctgacaaagcctgtgcatttgtcacatacacatcccgtgaaggtgcagagaaggctgca
caagagctcgccaacaggctagtcgtcaacggtcagaggctaaaactcacatggggaaga
cccagacctgagcaagatggttccaaccaacagggcagtgtggctcatagtgggttacta
cctcgagcagttatatctcagcagcacaatcaacccccaccaatgcagcagtactatatg
cagccaccaccagctaaccaagacaaaccttattacccatctatggacccacagagaatg
ggcgcagtcatttcaaatcaagaggctggtggttcaagcaccattgacaacagcggagct
tcatcttcttcttacgtgatgcctccacaccagtcatacccaccagcaccatatggatat
atgccaccgccttaccagcagcagtatcctcctaaccatcatcatcatcctggtcctatg
cagcactatgccccgcctccagcagcttacccgtacccacagcaacctggtcctggatca
agacctgcaccttctccagccgctgtctctgctccatcacctgactctgcacctgctggg
tctgcaggagcaccttcaggatcctctcaacaacctcctgctgctgcttctactgcaact
ggttcgtctcaatag
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integrated database retrieval system
