Camelina sativa (false flax): 104765403
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Entry
104765403 CDS
T05044
Name
(RefSeq) probable polygalacturonase At3g15720 isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104765403
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104765403
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104765403
NCBI-ProteinID:
XP_010487405
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Position
19:complement(7631143..7633678)
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AA seq
472 aa
AA seq
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MFVYCKYIHYISWFNSSFSKIYEEEGLVLEFLTIHSPNLHIFECIGCYSIRSGWRWSYRR
FTAWEAVCSGTGDGQLVVPAGMTFMLQPLKFQGSCKSAPIFVQILGNLVASSKGNWKGDK
DQWILFADIEGLVVEGDGEINGQGSSWWEHKGSRPTALKFKSCNNLRLSGLTHVDSPMAH
IHINDCNYVTISSLRINAPESSPNTDGIDVGGSSNVVIQDCLIATGDDCIAISSGTSNIR
ISGIDCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTTNGARIKTWQGGSGYARMITF
HGITLDNVENPIIIDQLYNGGDSDNAKDHKSSAVEVSNVMYSNFVGTSKTEYGVDFRCSE
RVPCTDIFLRDVKIATASSGSGQVAQGQCLNVRGASTLAVPGLECLALTADMLSSPEQTC
MLAQSVQPRTQPMQDPIWDFESRGKRLIVSNTILISFISLVTYIFGLLMENF
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtatactgtaaatatattcattatatttcatggtttaactcttctttctccaaa
atatatgaagaagaaggcttggttcttgagtttctcactattcattctccaaatcttcac
atcttcgaatgcattggatgttactcaattcggagcggttggagatggagttacagacga
ttcacagcttgggaagctgtctgtagcggaacaggagatgggcagcttgtcgtgccggca
gggatgacatttatgttacagcccctgaagtttcaaggctcttgcaaatcggcccctatt
tttgtgcagattttaggcaatctggttgcatcgagtaaaggaaattggaaaggagacaaa
gatcaatggattctttttgcagacattgaaggacttgtggttgaaggtgacggcgaaatt
aacggccagggttcgagctggtgggaacacaaaggctccagacctaccgcattgaagttc
aagagctgcaacaaccttagattgagtggattaacgcacgtagatagtccaatggctcac
attcacattaacgattgcaactacgtgaccatctcaagtctccggataaatgcgccggaa
tcaagtcctaacactgatggcatcgacgtaggcggttcatccaacgttgtcatccaagac
tgcctcatcgcaaccggtgatgattgcatagcgataagttcagggacgtcaaacatccgg
atttccggtatagactgcggaccaggccatggaataagcataggaagcttgggaaaagat
ggggagacagctaccgtggagaatgtttgtgtccaaaactgtaacttcagaggaactacg
aatggggctcggatcaaaacttggcagggtggatcgggttacgcgagaatgattactttc
catggaataactctagacaatgtagaaaatcctattataatcgatcagctttacaacgga
ggagattctgataatgccaaagatcataagtcgtcggcagtggaagtgagcaatgtgatg
tatagtaatttcgttgggacgtcgaagacagagtacggagttgacttcaggtgcagcgag
agagtaccgtgcacagatattttcttgagagacgtgaaaatagcaaccgcctcatcagga
tcagggcaagtcgcacaaggacaatgtttaaacgtgagaggtgcgtccacactcgctgtc
ccaggtctagaatgcttagcccttaccgcagatatgttgtcatcgccggaacaaacttgc
atgttggcacaatcagtgcaaccaagaacacaaccgatgcaagatccaatatgggatttt
gaaagcagagggaaacgacttatagtttccaataccatattaatttcatttatctctttg
gttacatacatttttggattattaatggaaaacttctaa
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