Camelina sativa (false flax): 104765786
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Entry
104765786 CDS
T05044
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104765786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104765786
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104765786
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
AAA_22
Motif
Other DBs
NCBI-GeneID:
104765786
NCBI-ProteinID:
XP_010487852
UniProt:
A0ABM0XLV2
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Position
19:complement(9852585..9858670)
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AA seq
910 aa
AA seq
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MEEEDEEILSSSESEDSSDNYQEESQESEGEIENPECEDLPAVFPSSDVDRKSKNVNDLL
RGNLVVQRQPLLPRDLSVSEGAAVCRKPFKPPCSHGYTSTGQLSRRLSARKRFVPWGSTT
PVVVVLPTKLEESPNIEKDEEEEVVYLPPDIEPLVLWQSEEDGSSNVTTIMVHSLLVKFL
RPHQREGVQFMFDCVSGLHGSENINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMVK
KAIIVTPTSLVSNWEAEIKKWVGDRIRLIALCESTRDDVISGIDSFTRPRSALQVLIISY
ETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEE
FFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPIATEEEKNLAADRSAELSSKVNQFILR
RTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRALADNAKQTKVLAYITALK
KLCNHPKLIYDTIKSSSPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHVLS
RLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNQLNDP
TKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFL
STGTIEEKVYQRQMSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGDVRSEIHEK
MSCIRCQNEASGTENIEEGNENNIDGNACQIDQEDIGGFAKDAGCFNLLKNSERQVGTPL
EEDLASWGHHFTSKSVPDAILQASAGDEVTFVFTNQVDGKLIPIESNVSPKVVESEDHNR
NQTANKRAFNKPQQRPREPLQPLSLNDTSKRVKLSTYKRLHGTSNIDDAPIQMSLQRPHQ
VSVNHHDDFV
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagatgaagagatcctttcgtcttccgagagcgaagattccagcgataat
tatcaagaagagtctcaagaatcggaaggagaaatcgaaaacccagagtgcgaagacctt
ccggcggtttttccttcatctgacgtcgatcggaaatctaagaacgtcaatgatcttttg
aggggaaatctggttgtacaacggcagccactcctgcctcgggatctttcagtttcagaa
ggagcggcagtttgtaggaagcccttcaagcctccgtgttctcatggttatacttccacg
gggcaactctctcgtcgtctttcggctcgaaaacggtttgtcccttggggttccacaact
ccggttgtggttgttttacctactaagctagaagaatcgcccaatatcgagaaagatgaa
gaagaggaagttgtttatttgccacctgatattgaacccttggtactgtggcaatctgaa
gaagatggatcgagcaatgtaacaacaatcatggtgcattcattgcttgtcaaatttctt
cgtcctcatcaaagagaaggtgtccagttcatgttcgattgtgtttcgggactacatggt
tctgaaaatataaatggttgcattctggctgatgatatgggtttggggaagacattgcag
tccattactttactatacacacttctttgtcaaggatttgatgggacacctatggttaaa
aaggccattatcgttacaccaacgagtcttgtcagtaactgggaagctgaaattaagaaa
tgggttggtgacaggattcgtcttatagccctctgtgagagcactagagatgatgttata
tctggaatagatagtttcactcgaccacgaagtgctttgcaggtacttatcatttcttac
gagacattccgaatgcactcatccaagttctgccagagtgaatcctgtgatcttctaata
tgtgatgaggctcataggttgaaaaatgaccagacactaactaacagggctttggcttcg
ttgacatgcaaacgtcgtgttttgttgtctggaactcccatgcagaatgacttggaagag
ttttttgccatggtaaactttacaaatccggggagtttaggtgatgctgcacattttcgc
cattattatgaggcacctattatatgtggaagagaacctatagccactgaggaagagaaa
aacttagctgctgaccgctccgcagaactgagttcaaaagtcaatcagtttattttgagg
agaaccaatgcattgctctcaaatcacttaccacctaagataattgaagtagtttgttgc
aagatgactactctccagtccactttgtacaaccattttataagctcaaaaaatcttaaa
agagcacttgctgataatgcaaagcaaaccaaagttttggcttatataacagctcttaag
aagctctgcaatcatccaaagctaatctacgatacaataaaaagcagcagtcctggaact
gttgggtttgagaattgcttagagtttttccctgcagaaatgttctctgggagatctgga
gcatggactgggggtgatggtgcctgggtcgagctctctgggaaaatgcatgttctctcc
agacttttggccaacctacgtcggaaaactgatgaccgcatagtccttgtatcaaactac
acacagacattggatcttttcgctcaactctgtcgtgaaagaaggtatccgtttctgagg
ctggatggatcaacaacaatcagcaagaggcagaagcttgttaaccagttgaacgaccca
acaaaggatgagtttgcatttctcttaagcagcaaggcgggtggctgtggattaaattta
ataggtgctaaccgacttgttttgttcgatcccgattggaatcctgccaatgataaacaa
gctgcggctagagtttggagagatgggcaaaagaaaagagtatatgtctacaggtttctt
agtaccggaactattgaagaaaaggtttaccagcgccagatgtcaaaagaagggcttcaa
aaagttattcagcatgaacagacggataacagcacgagacaggggaacttactttctaca
gaggatctacgagatttattttcatttcatggggatgttaggtctgaaatccatgaaaag
atgagctgcatcaggtgccaaaatgaggcctctggtactgaaaacatcgaagaaggaaat
gagaacaacatagatggcaatgcttgccagattgaccaagaagacattggcggatttgca
aaagatgctggatgctttaacttgttaaaaaactccgagagacaggtgggcactccattg
gaagaagatctagctagctggggtcatcattttacctcaaaatccgttccagatgctata
ctgcaagcttcagcaggtgacgaggttacatttgttttcacaaaccaggtagatgggaag
ctcattcccatcgaatcaaatgttagtccgaaagtagtggagtccgaagaccacaatcgg
aaccaaactgcaaataaacgagcgtttaacaaaccacaacaaagacctcgggaaccgctg
caacctttatctctcaacgatacctccaaaagagtcaagttgtctacttataagcgttta
catggtactagtaacattgatgatgctccgattcaaatgtctttgcaaagaccacatcaa
gtttctgtaaatcatcatgatgattttgtgtga
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