Camelina sativa (false flax): 104765868
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Entry
104765868 CDS
T05044
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104765868
04121 Ubiquitin system [BR:
csat04121
]
104765868
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104765868
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
104765868
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104765868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-RING_Vps41
Prok-RING_1
zf-RING_4
Baculo_RING
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
104765868
NCBI-ProteinID:
XP_010487953
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All DBs
Position
19:10399214..10401818
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AA seq
332 aa
AA seq
DB search
MSSGVNSTGSAAASAAVDKIFFCYQCNRTVTISITASADPFCPICNQGFLEEFEDRSPNP
PPNFNPNTDGSFFPMADPFSTLLPLLFGSSTASPSGMDFMSSSFFGPSMQPQARSTQQSD
AFDPVSFLQNHLQHLRSSGTHVQFVVENHPSDPAHRIPGNLGDYFFGPGLEQLIQQLAEN
DPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSGVKQMPCKHVFHQD
CLLPWLELHNSCPVCRYELPTDDPDYENRAQGVQGSGDGQGSVEGQQTPRRFNIQLPWPF
RRQDGSGSDPGSGSGAPGAGGGHLETRGEDLD
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccggcgtaaattcaactggctccgccgcagcatcagcggcggtcgacaagata
ttcttctgttaccagtgcaatcgcacagtcacaatctcgattaccgcatccgctgatcct
ttctgtcctatttgtaaccaagggtttctcgaagaattcgaagaccgcagccctaatcct
ccccccaatttcaaccctaacactgatggttcctttttccccatggctgatcctttctca
accttgctccctctcttattcggctcttccactgcttctccttccggcatggacttcatg
agctctagcttcttcggtccttcgatgcaaccacaggctcgctccactcagcagtctgac
gcgtttgatccggtttcgtttctccagaatcatctccagcatctgcgatctagcggtacg
cacgttcagttcgtggttgagaatcatccttcggatccagctcatcgtatacctgggaat
ctcggtgactacttctttggtccaggtcttgagcagttgattcagcagctggctgagaat
gatcctaaccgttacggaactcctcctgcttccaaatcagccatcgatgcgcttcctact
gttaaggtaactaaggatatgttgaaatcggagatgaaccagtgcgctgtttgtatggat
gagtttgaggatggtagcggtgttaagcagatgccttgtaagcatgtgtttcatcaggat
tgccttctcccgtggcttgagttgcacaactcctgtcccgtgtgtaggtatgagttgcct
actgatgatcctgattatgagaacagggctcaaggagttcaggggagtggtgatggacag
ggttcggttgagggacagcagactccaaggaggtttaacatacagcttccttggccgttc
aggagacaagatggctctggttctgatcctggttcagggtcaggagcacctggtgctggt
ggaggtcatcttgagaccaggggtgaagatttggattga
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