KEGG   Camelina sativa (false flax): 104766342
Entry
104766342         CDS       T05044                                 
Name
(RefSeq) chaperonin CPN60, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104766342
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104766342
   03110 Chaperones and folding catalysts [BR:csat03110]
    104766342
   03029 Mitochondrial biogenesis [BR:csat03029]
    104766342
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csat04147]
    104766342
Enzymes [BR:csat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     104766342
Messenger RNA biogenesis [BR:csat03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     104766342
Chaperones and folding catalysts [BR:csat03110]
 Heat shock proteins
  HSP60 / Chaperonin
   104766342
Mitochondrial biogenesis [BR:csat03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    104766342
Exosome [BR:csat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104766342
  Exosomal proteins of other body fluids (saliva and urine)
   104766342
  Exosomal proteins of breast cancer cells
   104766342
  Exosomal proteins of colorectal cancer cells
   104766342
  Exosomal proteins of bladder cancer cells
   104766342
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 104766342
NCBI-ProteinID: XP_010488513
UniProt: A0ABM0XNG1
LinkDB
Position
19:complement(14466644..14470352)
AA seq 577 aa
MYRFASNLASKARIAQNARQVSSRMSWSRNYAAKEIKFGVEARALMLKGVEDLADAVKVT
MGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDVAGDGTT
CATVLTRAIFTEGCKSVAAGMNAMDLRRGISMAVDSVVTNLKSKARMISTSEEIAQVGTI
SANGEREIGELIAKAMEKVGKEGVITIQDGKTLFNELEVVEGMKLDRGYTSPYFITNQKT
QKCELDDPLILIHEKKISSINSIVKVLELALKRQRPLLIVSEDVESDALATLILNKLRAG
IKVCAIKAPGFGENRKANLQDLAALTGGEVITEELGMNLEKVDLGMLGTCKKVTVSKDDT
VILDGAGDKKGIEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVG
EKKDRVTDALNATKAAVEEGILPGGGVALLYAARELEKLPTANFDQKIGVQIIQNALKTP
VHTIASNAGVEGAVIVGKLLEQDNTDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAAS
VSSLLTTTEAVVVDLPKDDSESAGAGAGMGGMGGMDY
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgtatcgtttcgcttctaacctcgcctccaaggcaaggattgctcaaaacgctcgccag
gtttccagtagaatgagctggagcaggaactatgcagccaaagaaattaagtttggtgtt
gaagctcgagctttgatgcttaagggtgttgaagatcttgctgatgctgttaaagtcacc
atgggtcctaagggacgtaatgttgtgattgagcaaagttggggtgctcctaaagtgaca
aaagatggtgtgacagttgccaaaagcattgagttcaaggacaaaatcaagaacgttggt
gccagtcttgtcaagcaggttgcaaatgctactaatgatgttgctggtgatggtaccact
tgtgctactgtcctcacccgggctatattcaccgaaggttgcaaatcagttgccgcaggt
atgaatgcgatggacttgagacgaggtatctccatggcagttgattctgtggtgacaaac
cttaaaagcaaggcgaggatgatcagcacatctgaagagattgcacaggttgggaccatt
tctgccaatggagagagggaaattggtgagcttattgcaaaggctatggagaaggttggc
aaagaaggtgtaatcacaatccaagatggaaagacattgtttaacgagttggaagttgta
gaggggatgaagttggacagaggttatacgtccccatactttattactaatcaaaaaacc
caaaaatgtgaactagacgatcctctcattcttatccatgagaagaagatctcaagtatc
aactctatcgtgaaagtgttggagttggctctgaagaggcaaagaccactgttgattgtt
tctgaagatgtggaaagtgatgctcttgcaactcttatccttaacaagctccgtgccgga
atcaaggtctgtgccatcaaggcccctgggtttggagagaataggaaagccaatttgcaa
gaccttgctgcccttactggtggagaggttatcacggaagagcttggcatgaatctggag
aaggtggacctgggcatgctaggaacctgcaaaaaggttacagtctccaaggacgacact
gttattcttgatggcgctggtgacaagaaaggcattgaggaaagatgtgagcagattagg
tcagcaattgaactcagcacctcagattatgacaaggagaaactgcaagaacggttggct
aagctctctggaggtgttgcagttttgaagattggaggagcaagtgaagctgaagttggt
gagaagaaagacagagtgacagatgcattgaatgccactaaagcagctgttgaagagggt
attttgccaggaggaggtgtggctcttctatatgcagcgagagagttggaaaaacttcca
acagccaactttgatcagaagattggtgtgcagatcattcagaacgcattgaagactcct
gttcacacaatcgcttcaaatgctggagttgaaggcgctgttatagttggcaagctcttg
gaacaagataacacagacctcggttatgatgcagctaaaggtgaatacgtggatatggtg
aaagctggaatcatagaccctctgaaagtgatcaggacggctctggttgatgctgccagt
gtgtcatctttgttgacaacaactgaagctgtagtggttgatcttccgaaagacgatagt
gagtcagcaggagctggagcaggcatgggtggaatgggaggcatggactactag

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