Camelina sativa (false flax): 104766342
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Entry
104766342 CDS
T05044
Name
(RefSeq) chaperonin CPN60, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104766342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104766342
03110 Chaperones and folding catalysts [BR:
csat03110
]
104766342
03029 Mitochondrial biogenesis [BR:
csat03029
]
104766342
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104766342
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104766342
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104766342
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP60 / Chaperonin
104766342
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104766342
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104766342
Exosomal proteins of other body fluids (saliva and urine)
104766342
Exosomal proteins of breast cancer cells
104766342
Exosomal proteins of colorectal cancer cells
104766342
Exosomal proteins of bladder cancer cells
104766342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
104766342
NCBI-ProteinID:
XP_010488513
UniProt:
A0ABM0XNG1
LinkDB
All DBs
Position
19:complement(14466644..14470352)
Genome browser
AA seq
577 aa
AA seq
DB search
MYRFASNLASKARIAQNARQVSSRMSWSRNYAAKEIKFGVEARALMLKGVEDLADAVKVT
MGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDVAGDGTT
CATVLTRAIFTEGCKSVAAGMNAMDLRRGISMAVDSVVTNLKSKARMISTSEEIAQVGTI
SANGEREIGELIAKAMEKVGKEGVITIQDGKTLFNELEVVEGMKLDRGYTSPYFITNQKT
QKCELDDPLILIHEKKISSINSIVKVLELALKRQRPLLIVSEDVESDALATLILNKLRAG
IKVCAIKAPGFGENRKANLQDLAALTGGEVITEELGMNLEKVDLGMLGTCKKVTVSKDDT
VILDGAGDKKGIEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVG
EKKDRVTDALNATKAAVEEGILPGGGVALLYAARELEKLPTANFDQKIGVQIIQNALKTP
VHTIASNAGVEGAVIVGKLLEQDNTDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAAS
VSSLLTTTEAVVVDLPKDDSESAGAGAGMGGMGGMDY
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtttcgcttctaacctcgcctccaaggcaaggattgctcaaaacgctcgccag
gtttccagtagaatgagctggagcaggaactatgcagccaaagaaattaagtttggtgtt
gaagctcgagctttgatgcttaagggtgttgaagatcttgctgatgctgttaaagtcacc
atgggtcctaagggacgtaatgttgtgattgagcaaagttggggtgctcctaaagtgaca
aaagatggtgtgacagttgccaaaagcattgagttcaaggacaaaatcaagaacgttggt
gccagtcttgtcaagcaggttgcaaatgctactaatgatgttgctggtgatggtaccact
tgtgctactgtcctcacccgggctatattcaccgaaggttgcaaatcagttgccgcaggt
atgaatgcgatggacttgagacgaggtatctccatggcagttgattctgtggtgacaaac
cttaaaagcaaggcgaggatgatcagcacatctgaagagattgcacaggttgggaccatt
tctgccaatggagagagggaaattggtgagcttattgcaaaggctatggagaaggttggc
aaagaaggtgtaatcacaatccaagatggaaagacattgtttaacgagttggaagttgta
gaggggatgaagttggacagaggttatacgtccccatactttattactaatcaaaaaacc
caaaaatgtgaactagacgatcctctcattcttatccatgagaagaagatctcaagtatc
aactctatcgtgaaagtgttggagttggctctgaagaggcaaagaccactgttgattgtt
tctgaagatgtggaaagtgatgctcttgcaactcttatccttaacaagctccgtgccgga
atcaaggtctgtgccatcaaggcccctgggtttggagagaataggaaagccaatttgcaa
gaccttgctgcccttactggtggagaggttatcacggaagagcttggcatgaatctggag
aaggtggacctgggcatgctaggaacctgcaaaaaggttacagtctccaaggacgacact
gttattcttgatggcgctggtgacaagaaaggcattgaggaaagatgtgagcagattagg
tcagcaattgaactcagcacctcagattatgacaaggagaaactgcaagaacggttggct
aagctctctggaggtgttgcagttttgaagattggaggagcaagtgaagctgaagttggt
gagaagaaagacagagtgacagatgcattgaatgccactaaagcagctgttgaagagggt
attttgccaggaggaggtgtggctcttctatatgcagcgagagagttggaaaaacttcca
acagccaactttgatcagaagattggtgtgcagatcattcagaacgcattgaagactcct
gttcacacaatcgcttcaaatgctggagttgaaggcgctgttatagttggcaagctcttg
gaacaagataacacagacctcggttatgatgcagctaaaggtgaatacgtggatatggtg
aaagctggaatcatagaccctctgaaagtgatcaggacggctctggttgatgctgccagt
gtgtcatctttgttgacaacaactgaagctgtagtggttgatcttccgaaagacgatagt
gagtcagcaggagctggagcaggcatgggtggaatgggaggcatggactactag
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