Camelina sativa (false flax): 104766363
Help
Entry
104766363 CDS
T05044
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104766363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104766363
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104766363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
ResIII
Helicase_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
104766363
NCBI-ProteinID:
XP_010488536
LinkDB
All DBs
Position
19:complement(14724598..14728594)
Genome browser
AA seq
1114 aa
AA seq
DB search
MDMTTCVARRTRSRTESYLNSILNKSKGIAESEGTLNSRKGNKRGVSLRDACSPSPRKKK
RRLRKVSDDDDDDVEFVRTDYPEGKREGVDGDNVGSNSVGLESKSLDCGDRVCDFDLDDV
NLRGEEKTSNFDLDDDVVFVGTIPRENEHVEGYNVGSPRVCVVDSDLRGEEKGSTLNPLS
PDGDVVFIGTISGEKEHVEDGNVGSRVCDILLNDIKLKGSESDDVEGGSVEELGTDSGEE
FSGQDRDSGESDTDGEDADSDSSDYVVESSVSSYVDSSDGDFVCSEDEEGETTDVAAKEK
KSPSEKVRYHKKSRTSRRENNLNVFQLLAKSIWDGKKVLEDEICSGDETVDVDCRQDAIV
RESSSEKVNEEQGKPRRPRSLHRVKEKNHSKGESFVDGEKLCDGQEKIHCSTEDSPPLIL
RFGCEEPVLIEKTDEEKELDSLWEDMAVALTLEGMDSSTPAKVGDMLCSKERHDFVLEEE
IGLICRHCSHVAVEIKDISPAMDKYRANINDNKKSSEKKGEPLFDRLEFDASDHSSYPAS
LDNTEGTVWQYVPGIRDTLYPHQQEGFEFIWKNLAGTTKLDEFNSVGVKGSGGCIISHKA
GTGKTRLTIVFLQSYLERFPDSHPVVIAPATLMRTWEEECRKWNADIPFFNMNSRQFSGY
EDASAVSRLNGNRQHNSVRMVKLYSWWNKKSILGVSYPLYEKLAADKNAGEMQVFRRMLL
ELPGLLVLDEGHTPRNQNSLIWKVLTEVRTEKRIILSGTLFQNNFKELSNVLCLARPALK
DTISSRLQELSKRSQEGEHGRVNEEIGIVDLKVMIAPFVHVHEGTILEESLPGLKDCVVV
LNPPFQQKKILDRIDTSQNTFEFEHKLSAVSVHPSLYLCCNPTKKEDLVIGPATLGTLKR
LRLDYKEGVKTKFLINFIRITEKVKEKVLVYSQYIDTLKLIMDQLSAEFSWTEGEEILLM
HGKVEQRERQQLINNFNKQDSKSKVLLASTKACSEGISLVGASRVVFLDVVWNPSVESQA
ISRAYRIGQKRAVFVYHLMVKDTSEWDKYCKQSEKYRISELVFSSTNEKDKPINNEAVSE
DRILDEMVRLNKLKDIFEKILYNPKESDMFTSIF
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggatatgactacttgtgttgctaggagaacccgttcgaggactgaatcttacttgaac
tcgattctgaataaatcgaaggggattgctgagtctgagggtactttaaattcgaggaag
gggaataagagaggagtgagcttgcgcgatgcttgttcaccgtctccgaggaagaagaaa
cggcggctgaggaaggtgagtgacgacgacgacgacgatgttgaatttgtcagaactgat
tatccagaaggtaagcgagaaggtgtggatggtgataatgttggttctaattctgtgggt
ttggaatcgaaatcgcttgattgtggtgatagggtttgtgattttgatttggatgatgtt
aatttgaggggtgaagagaaaacttctaattttgatttggatgatgatgttgtttttgtt
gggactatccctagagagaatgagcatgtagagggttacaatgttggttctcctagggta
tgtgtggttgatagtgatttgaggggtgaggagaaaggttctactttgaatcctttatct
ccggatggggatgttgtttttattggaactatctcgggagagaaggaacatgtcgaggat
ggcaatgttggttctagggtttgtgatattcttctgaatgatattaagttgaagggttct
gagtctgatgatgttgaaggaggttctgtggaggaattagggacggattcaggcgaggaa
tttagtggtcaagatagagattctggtgaaagtgatactgatggtgaagatgctgattct
gactcatctgattacgtggtggaaagttcagtttcttcttatgttgatagctctgatggt
gatttcgtttgttctgaggatgaagagggtgaaaccacagatgttgctgctaaagagaaa
aagagcccaagtgaaaaagtacgctaccataagaagtcgaggacttctcgtagggagaat
aacttgaatgtatttcagctgctagctaaatctatttgggatggaaagaaagttttggag
gatgagatctgctctggggacgaaaccgtggacgttgattgtagacaagatgctatagta
agggagagctcaagtgaaaaggtaaatgaagaacaggggaaaccaaggagaccgaggagt
ttgcatagggtaaaggagaagaaccactcgaagggtgagagctttgttgatggcgaaaaa
ctatgtgatggacaagagaaaatacactgctcgacagaagattcacctcctttaatcttg
agatttggctgcgaggagccggtgcttattgagaaaacagatgaggagaaagaattagac
agtttgtgggaagatatggccgttgctctaacattagaaggaatggactcatctactcct
gctaaagttggtgatatgttatgtagcaaagagaggcacgactttgtgctggaggaggaa
attggtttgatatgccgccactgttctcatgtggccgtcgagatcaaagacatctcacca
gctatggacaagtatcgtgctaatatcaatgacaataagaaatctagtgagaaaaagggt
gaacctttatttgataggcttgagtttgatgcttcagatcacagcagttatcccgcctct
ttggataatacagaaggaaccgtctggcaatacgtccctggcatcagagatactttgtac
ccacaccaacaagaaggctttgaatttatttggaagaacttagctgggacaacaaaactt
gatgagtttaacagcgtaggggttaagggaagcggtggatgcattatttctcataaggct
ggaactggtaagacacgcttgaccatcgtttttcttcagtcgtatttagaacggtttcca
gatagccatcctgtggtcatagctcctgcaactctaatgcgtacgtgggaagaagaatgc
aggaaatggaacgcagatattccattttttaacatgaatagtcggcagttctcagggtat
gaggacgcttcagctgtctcacgtttaaatggaaataggcaacataattccgtccgtatg
gttaagttatattcgtggtggaataagaaaagcattcttggagttagctaccctctgtat
gagaagctcgcggcagataagaacgctggagaaatgcaagtgtttaggaggatgttgcta
gaattgccggggttgctggtccttgacgaggggcacaccccgagaaaccagaatagtctc
atttggaaagtgcttactgaagtcagaacagaaaagcgtatcattctttcagggacactg
ttccagaataatttcaaggaactttcaaatgtcttatgcctggcaagaccagctttgaaa
gatacgatttcttcgaggttacaggaacttagcaagcggagccaagaaggcgaacatgga
agggtgaatgaagaaattggaattgtggatcttaaggttatgattgctccttttgtgcat
gtccacgaaggaaccatccttgaagaaagccttccaggtctaaaagactgtgttgtggtg
ttgaacccgccttttcaacagaagaaaattctggacagaattgatacttctcaaaacaca
tttgaatttgagcacaagctttcagctgtttcagtacacccatctctgtatttgtgctgc
aatccgacaaagaaggaagacttggttattgggccagcaacattaggaactctgaagagg
cttagacttgactacaaggaaggtgtgaaaacaaagttccttatcaacttcatccgcatc
actgaaaaagtgaaagagaaagtgttggtgtatagccaatacattgacactctaaagctg
atcatggatcagctcagtgcagaatttagctggactgaaggggaagaaattctcttaatg
catggtaaagttgaacaaagagagaggcagcaactgatcaacaacttcaacaaacaagac
agtaaatctaaagttctactggcatcaacaaaagcatgttctgagggtattagtcttgtt
ggcgcttcaagagttgtgtttcttgatgttgtttggaacccttctgttgaaagccaagcc
ataagtcgagcttacagaattggtcaaaagcgggctgtgttcgtttaccatctcatggtt
aaagatacatctgagtgggacaagtactgtaagcaaagtgagaaatatcgcatatctgaa
ctggtcttctcttctaccaatgagaaggataagccgattaacaacgaagctgtttctgaa
gatagaatcctcgacgagatggttcgactcaataagctgaaagacatctttgagaagata
ctttataatccaaaggagtctgacatgtttaccagcatcttctga
DBGET
integrated database retrieval system
