Camelina sativa (false flax): 104766532
Help
Entry
104766532 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104766532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104766532
03036 Chromosome and associated proteins [BR:
csat03036
]
104766532
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104766532
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104766532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
104766532
NCBI-ProteinID:
XP_010488742
LinkDB
All DBs
Position
19:complement(16541304..16547062)
Genome browser
AA seq
1303 aa
AA seq
DB search
MFSPLTKRAKQSSRNDRTPRNRAAPPDSPVTPATQNRNTNFISDRPATGTPAPWAPRLSV
LARVSPVNNGERGDDTDQLKPVFVGEFPQLLRDEQSYPGDACVSGGMDSETCLSWFITGS
KLFVWSHLTTLPSRKCVVLELPSGVLANEESGSGLQDGKSWLVSVVPWDTSAGAASRAAR
SRSPVGIVMCNRKTRAVVYWSDIFSGQEAAPVTSIGSSDEHVVYRSPTGRISSSFIKRQS
NGVRSGRAEYSDLNSLITTAVAAAERLCIAIACSSNGELWQYTCSPTGVKSNQVELNISS
SSVSEGYPRSLIWRFSQGLARESCWQFFMLTDCDIHCFTIEPYPDLTVSKVWQHEIVGSD
GDSGIKKDIASQKQIWPLDLQVDDQGKVITVLVATICMDRASSSSYTQYSLLTLQHKSEM
RFADGRKERFLEKQGPIQVIIPKARVEDKDFLFSMKLRVGGRPPGSAIILSGDGTATVCY
CHGSSTRLYKFDLPYDAGKVLDASVLSSTDEHEYGAWTVLTEKAGVWAIPEKAVVLGGVE
PPERSLSRKNSSNERSTRDETRMTPYGIDRTAGKEISDIQNSGDKGNPKMGFTRQTAREE
ESEALLGQLFENFLLSGKVDGSLEKLSQSGAFDRDGETNVFARKSKSIVDTLAKHWTTTR
GAEIVAMTVISSQLVEKQQKHENFLHFLALSKCHEELCSKQRHSLQIILENGEKLAAMIQ
LRELQNLINQNRSARFGSPHAGSEDQVSCALWDLIQFVGERARRNTVLLMDRDNSEVFYS
KVSELEEVFYCLNRQLEYIIRADQPLGTQVQRACELSNACATILQTALDYKNEHQMWYPP
LEGLIPWHSQPVVCNGLWCIASFMLHLLTEGSRIDISAKSDIYMHLEVLTEVLLEAYAGS
TFAKLEMEDEKKGRRNEYWTRRDTIFNSLYQQAKDFMEAEIQGIRERTERTNEDIFRNRC
SNLLSIAKRHAGYNIMWRICYDLNDTGVLKNLMHEGVGQQGGFSYFVFQQLYDMKQFSKL
LRLGEEFQDELLIFLKRHSDLLWLHQAFLHQFSSASDTLHTLALAQDEESMTTIEERAVP
EPEDVQTTFADRKRFLNLSKIAYVADKDADSESKVKRIEADIQLLKLQEEITKALPNGEA
KNKLFRPEELIEICLTIQGRWTAIKAFEVFAWTSCSFRENHSSLLEECWRNAADQDDWDR
LHQASTNEGWSDKETLQNLSNTALFQASQRCYGPTRVKTFDGDFAQVLSLRRENPEDSTS
SVEEVLMSHKDFAEAGKLMLTAIMLGCVEEEGIVAEEFLSPME
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgttctctccattgacgaagagagctaagcagagctctcgtaatgacagaactccacga
aatcgagccgctccgccagattctccagtaactccggcaactcaaaatcggaacactaat
ttcatctcagatcgtccagccactggaactcctgctccttgggctcctcgtttatctgtt
ctcgctagagtttctcctgtaaacaatggtgaaagaggagatgatacagatcaattgaag
cctgtattcgtcggagagtttcctcaattgttgcgagatgaacaaagttatcctggtgat
gcttgtgtctccggtggtatggattcagaaacttgtctttcttggtttatcactggaagt
aaactttttgtttggagtcatttgacgaccctaccgtcgagaaaatgcgttgttctcgag
cttccgtctggtgttttggctaatgaagagtctggtagtggtttacaagatggtaaaagc
tggttggttagtgttgtcccttgggatacctctgctggtgcagcaagtagggctgctcga
tctcgtagccctgttggtattgtcatgtgtaacaggaaaactcgagctgttgtgtattgg
tcggacatcttttctggtcaggaagctgcccctgttactagtattggatcttctgatgaa
catgttgtttatcgttcacctacaggcagaataagctcatcattcattaagcgacaaagc
aatggggttagaagcggcagagcagaatatagcgatctcaactctttgattactactgca
gtagctgcagctgaacgcctttgtattgctattgcttgcagttctaatggtgagctatgg
caatatacttgtagtcctacaggtgttaaaagtaatcaagtagagttgaacattagctct
tcctccgtaagtgaggggtatccaaggtccttaatctggcgtttttcacaaggattggca
agagagtcttgttggcagtttttcatgttgacagattgtgacatacattgttttactatt
gaaccttatcctgatttaactgtttcaaaagtctggcaacatgagattgttggcagtgat
ggtgattcaggtatcaagaaagatatagctagtcaaaagcaaatttggcctctagatctg
caggtagatgatcagggtaaagtgattactgttcttgttgccactatctgcatggaccgt
gccagcagttctagctatacacaatattcgcttttgactttgcaacataaatctgagatg
agatttgcagatgggagaaaggaaaggttcctggagaaacaaggtccaatccaagtcata
atcccaaaagcaagagtggaggataaagattttttattctctatgaaactcagagttggt
ggcagacccccagggtcagctataattctttcaggtgatggaacagccacagtttgctac
tgtcatggaagttctacccgtctctacaagtttgatttaccttatgatgctggcaaggtc
ttggatgcttcagttctttcctcaactgatgaacatgaatatggtgcatggactgtgtta
actgagaaagcaggagtatgggcaattccagagaaagcagttgtgcttggtggagttgaa
cctccagagagaagtttgtcacgcaaaaatagttccaatgagaggtctacacgagacgag
acaaggatgacaccatatggcattgatagaactgccggaaaggagatttctgacatacag
aatagtggagataaaggaaaccctaaaatgggatttactcgtcaaacagcccgtgaggaa
gaatcagaagctttgcttggccagctctttgagaattttctgttatctgggaaagttgat
ggatccttggagaagcttagtcaatctggtgcatttgatagagatggagagaccaatgtt
tttgctcgcaaaagcaaatctatagttgacacattagctaagcattggacaacaactaga
ggggctgagatagtagctatgactgttatatcttcacaattggttgagaaacaacagaag
catgagaattttctacactttcttgctctatccaaatgccatgaggagctgtgctctaaa
cagagacattctttgcaaataattctggaaaatggtgaaaaacttgctgccatgattcaa
ctccgggaactgcaaaatttgattaaccagaatcgctcagccagatttggctctccgcat
gctggctcagaggatcaagtttcatgtgccctttgggatcttattcaatttgtaggggag
agagctcggagaaataccgttctcttgatggacagagataattctgaagttttctacagc
aaggtatctgaacttgaggaagtattttattgtctaaacaggcaattagagtacataatc
agagctgaccaaccactaggaacgcaagtgcagagagcctgcgaactctcaaatgcatgt
gctacaattcttcagactgccttagattacaaaaatgagcatcaaatgtggtatccacca
cttgaaggtttaataccttggcactctcagcctgttgtatgtaatggactgtggtgcatt
gcgtcctttatgcttcatctgttaactgagggatctaggattgatatatctgctaaatca
gatatatacatgcatctcgaagtacttactgaagttttacttgaggcttatgccggttct
acctttgcaaaattggagatggaagacgaaaagaaaggtcggcgtaatgagtactggact
cggcgagataccatttttaactccctttatcaacaagctaaagattttatggaagcagaa
atccagggcatcagagaaagaactgaaaggacaaatgaagatatcttcagaaaccgttgc
tcaaatttgctatcgattgcaaagcgacatgcaggctataacattatgtggaggatatgt
tatgatcttaatgatacaggggtgctcaaaaacttaatgcatgagggtgtgggacaacaa
ggaggattcagttactttgtattccagcaactctatgatatgaaacagttctctaaactt
ctacggcttggagaagaattccaggacgagctactgatatttctaaagcgtcattctgat
ctgctgtggcttcatcaggcgtttcttcatcaattctcatctgcttctgacactcttcat
acattggctctagcacaagatgaagagtctatgacaactattgaagaaagagcggtgcca
gaacctgaagatgtacaaacaacattcgcagaccgcaagaggtttctgaacctttcaaag
atagcctatgtggcagataaggatgctgattccgaatcgaaagtgaagcgcattgaagct
gatatccagttactgaagctgcaggaagaaataacaaaagccttgccaaatggagaagct
aaaaacaagctgttcagacccgaggagcttattgaaatttgtctcactatccagggccga
tggacagctataaaagcttttgaggtgtttgcatggacgagctgttcattccgtgagaat
catagcagtcttttggaagaatgctggagaaatgctgcggatcaagatgactgggacagg
ctccatcaagcctctactaatgaaggttggagcgacaaagaaacattacagaatctaagt
aacactgcccttttccaggcttcccaaaggtgttacggaccaacccgagtcaaaactttt
gatggggattttgcacaagtcctttccctgagaagagagaaccctgaggattcaacctct
tccgtagaggaagtgttgatgagccacaaagatttcgccgaggcagggaaacttatgcta
actgcaatcatgctgggttgtgtagaagaagagggtattgtagcagaagagttcttatct
cctatggagtaa
DBGET
integrated database retrieval system
