Camelina sativa (false flax): 104766582
Help
Entry
104766582 CDS
T05044
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03030
DNA replication
csat03420
Nucleotide excision repair
csat03430
Mismatch repair
csat03440
Homologous recombination
csat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104766582
03420 Nucleotide excision repair
104766582
03430 Mismatch repair
104766582
03440 Homologous recombination
104766582
03460 Fanconi anemia pathway
104766582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104766582
03032 DNA replication proteins [BR:
csat03032
]
104766582
03400 DNA repair and recombination proteins [BR:
csat03400
]
104766582
Transcription factors [BR:
csat03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104766582
DNA replication proteins [BR:
csat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104766582
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104766582
MMR (mismatch excision repair)
104766582
DSBR (double strand breaks repair)
HR (homologous recombination)
104766582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
104766582
NCBI-ProteinID:
XP_010488796
LinkDB
All DBs
Position
19:17255920..17259046
Genome browser
AA seq
640 aa
AA seq
DB search
MPVSLTPNAIKAINAGDVNLKPLLQVLDIKMIGRSQERSQERYRFLISDGVSAQHAMVAV
QLNDRVKSGQVDKGSIVQLIDYICSDVKGRKVIVVLKMETIVPHSETVGNPAIFGETDTE
TQKTLSAVGNIQPSNRVGFNEPTVQHSVNKAPPRGTNIHNPANSTSSFRPSVQPSYQPPA
SYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLL
DSDGGEIRVTCFNAVVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTV
ELCPDEDGSIPRQQFSFRPIGDIEDAENNTILDVIGVVTSVNPSVPILRKNGMETHRRIL
NLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSASHPVLAIKAGKVSDFSGKSVGTISSTQ
LFINPDFPEAHKLRNWFDHGGKDTASFSISRDTMPGGSSRNEIRKSVSQIKEEGLGRSEK
PDWITVKATVSFIKTDSFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDDCDYRY
LLQVQIQDHTGLTWVTAFQETGEEIMGCPAKKLYALKYELEKEEEFAEIVRDRLFHQYML
KLKIKEESYGDEQRVKMTVVKVDAVNYTSESKFLLDLLIR
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgagtttgactccgaacgcaatcaaggcgataaacgccggcgacgtcaatttg
aagccgttgttgcaggttttagatatcaaaatgatagggagaagccaagagagaagccag
gagaggtatcgtttcctcatttccgatggtgtttcagctcaacatgctatggtcgcggtt
cagcttaatgatcgggtcaagtccggacaagttgataaaggatctatcgttcagcttatt
gattacatttgcagcgatgtcaaaggccgcaaggttattgtggtgctgaaaatggagaca
atagtaccacattctgagacagtcgggaaccccgcaatatttggagaaacagatacagaa
acccaaaagacgctttcagctgtaggcaatatacaaccttcgaatagggttggttttaat
gaaccaacggttcagcattcagttaataaagcacctcccagaggcacaaacattcataat
ccagccaacagtacttcaagtttcaggccatctgttcaaccttcatatcaaccgcctgca
agctacagaaatcatggacccataatgaagaacgaggctccagctcgagtcatccctatt
gctgctctcaatccataccaaggtcggtgggctattaaggctagagtaactgcgaaagga
gatatccgacgatataataatgcaaaaggagatggaaaagttttctcgtttgatctgctt
gactctgatggaggggagattcgggttacctgctttaatgctgttgtcgaccgattctat
gatgtcactgaggttgggaaggtatatttgatttcaaagggaagtttgaagcctgcacag
aaaaatttcaaccacttaaagaatgagtgggaaattttcttggagtcaacatcgactgtg
gagctttgccctgatgaagatggctccataccaaggcaacagttctccttccgtcctata
ggtgacattgaggacgctgagaacaataccatactcgatgtgattggggttgtgacttct
gtgaacccctcagtgccaatcttgagaaagaatgggatggaaacccataggagaatcctg
aatctgaaggatgaatcgggaaaagctgtagaggtaacattatggggagaattctgtaac
cgagatggtcggcaacttgaagagatggttgattcagcctctcacccggttttagctata
aaagctggaaaagtaagcgacttcagtgggaagtctgtggggacaatctcttcaacacag
cttttcataaatccagatttccctgaagcccataaactgaggaactggttcgatcacggg
ggaaaagatactgcatccttctccatttctagagataccatgcctggaggaagttcaagg
aatgagataagaaaaagtgtttctcagatcaaagaggaaggccttggaagatcagagaag
cctgactggatcactgtgaaagcaactgtatcattcatcaaaacagatagcttctgttac
acagcttgccctttgatgattggagataaacaatgcaacaaaaaggtgacacggtctgga
acaaacaggtggctctgtgaccggtgcaaccaagagtctgatgattgcgactacagatac
ctgcttcaggtgcagatacaagaccacactgggttgacttgggtaactgcgtttcaagaa
acgggagaagaaatcatgggatgtccggctaagaagctttacgcattgaaatacgaacta
gagaaggaggaagaatttgcagagattgttagagacagactgtttcatcagtatatgtta
aagctgaagatcaaagaggaatcgtatggggatgaacaaagagttaagatgacagtggtg
aaggtagatgcggtgaattatacatccgaaagtaaattcttgcttgatttgctcataagg
taa
DBGET
integrated database retrieval system
