Camelina sativa (false flax): 104766822
Help
Entry
104766822 CDS
T05044
Name
(RefSeq) protein CHROMATIN REMODELING 20-like isoform X2
KO
K10779
transcriptional regulator ATRX
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104766822
03036 Chromosome and associated proteins [BR:
csat03036
]
104766822
Transcription factors [BR:
csat03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
104766822
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104766822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
104766822
NCBI-ProteinID:
XP_010489091
LinkDB
All DBs
Position
3:3603986..3616300
Genome browser
AA seq
1482 aa
AA seq
DB search
MEPNEGKGKDQGEKPEEKVYTVEATEDVMDITDEIMEVDQEMMEAKLEEVKARDESGEHI
DVQMEENNNQDGQKDENMQATDSISESSELSSEENEQLLLGQDDDLDHEKPLSEEEIEEL
ISDFLGVESKAADAQEALEKESLSNVESEVRKELSQTLSGEELNKAVAAEMMTFKDEWEA
TLDELETESANLLEQLDGAGIELPKLYKMIESQAPNGCHTEAWKQRAHWVGTQVTKETVE
SLANAERFLHTHRPVRKRHGKLLEEGASGFLEKKLADGAAKESLAGTSELDWSSLNKVFS
EKRDESISFGSKDWASVYLASTPQQAAAMGLEFPGVNEVEEIEEIDAGLADPFLADAIEN
ERELPLSEEQKKNYIRVKEEDDLNSDRELQLRLKRKRRNKRSKQVIRCAAENMDDDCVYL
NGNYIAQSSGEDRVKIPETSTQVHSNEVNKVENGNLSNSDVDTMRDDSHNPANSFRCTAC
NNVAVEVHTHPLLEVIVCMDCKRSIEDRVAKVEDSLERSCQWCGHITDLIDCRTCEKLFC
ASCIKRNIGEEYLSEAQSSGWDCCCCSPMPLQRLTLELEKAIRDKKSVELSSDSSSDSSS
DSSSDNNSADVNVAISLKKKSKKRIRRIIDDAELGKDTRRKIAIEKERQERLRSLQFSAR
YKTISSMGDLKSIPEGAEVEVLGDAHSGYIVNVAREIGEGAVRVPCSISAKLKVHQVTGI
RFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLKTALIVTP
VNVLHNWRSEFMKWMPSEVKPLRIFMLEDVSRERRLDLLKKWRNKGGVFLMGYAAFRNLS
LGRGVKDLNAAREICSALRDGPDILVCDEAHIIKNTRADTTQALKQVKCQRRIALTGSPL
QNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQL
KGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRKLYQRFLRLYGFSDGRADERMRKNFFA
AYQVLAQILNHPGIPQLRREDSKNGRRGSIVDIPDDCSSEENTDYNMVTGEKQRTMNDLQ
DKVDGYLQKDWWVDLLQKNNYKVAEYSGKMILLLDILSMCADVGDKALVFSQSIPTLDLI
ELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAG
SLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQV
TKEGLAARVVDRQQVHRTISKEEMLHLFEFDDDDEKSDTVTEISKQNDVAQCNLVENSQK
QKASLPRVGCDKLMESLLQRHGPNWISNFHEHETLLQENEEERLTKEEKDMAWEVYRRAL
EWEEVQRVPLSESPVLPKPSPSVQTEPVRMPKLFNRSRFVIRNCTRTAHQLTLISQGIRV
GNSTFCGECGRVLTWADVLPAAKLSEVNLLGNEDWKRSWKRS
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggagccaaatgaaggaaaagggaaggatcaaggtgaaaagccagaggagaaggtgtat
acagtggaggcaacagaggatgttatggatataacagacgaaattatggaagtagaccag
gagatgatggaggcaaagcttgaagaggtgaaagctagagatgagagtggggagcacatt
gatgtgcagatggaagaaaataacaatcaggatgggcaaaaagatgagaatatgcaagcc
actgatagtatatcggaaagttctgaattaagttcagaagaaaatgaacaattgctgttg
ggacaagatgatgacttggatcatgagaaacctctgagcgaggaagaaatagaagagtta
atttcagattttttgggagttgagagtaaggctgcagatgctcaagaagcacttgaaaag
gagtctctttctaatgtagagagtgaagttaggaaggaattatcacaaacactcagtggt
gaagagttgaataaagctgttgctgctgaaatgatgacttttaaagatgaatgggaggca
actctggatgagcttgaaacagaaagcgcaaacctgttggagcaacttgatggtgcgggc
attgagcttccaaaattgtataaaatgatagaaagtcaagcccctaatggttgccacact
gaagcttggaaacaaagagcccactgggttgggactcaggtgacaaaagaaactgtggaa
tcattggctaacgctgagaggtttcttcacactcaccgtcctgtccgaaaacgacacgga
aaacttttggaggagggagctagtggttttctggagaaaaagcttgctgatggtgctgcc
aaagaatctctagctggaacatctgaacttgactggtcgtctctaaacaaagttttttcg
gaaaaaagggatgagtctatttcctttggtagtaaggattgggcgtctgtttacttggca
agcactccacaacaagctgcagccatgggattagaatttccaggagtcaatgaggtagag
gaaattgaagagattgatgcaggcttggcagatccatttttggccgatgcaatagaaaat
gaaagagaacttcccctttctgaagaacaaaagaaaaattatataagggtcaaagaagaa
gatgatttaaatagcgatcgtgaacttcaacttcgtttgaaacggaagagacgcaataaa
agatctaaacaggttatcaggtgtgctgcagagaatatggatgatgactgtgtgtatttg
aatggtaattatattgcccaaagttctggtgaagatcgagtaaaaattcctgagaccagc
actcaagttcatagcaatgaagtcaacaaagtggaaaacgggaatctgtctaattcagat
gtggataccatgagagatgattcacataatccagcaaacagtttcaggtgtactgcctgt
aataacgtagctgtggaagtgcatactcacccccttttggaagtaatagtttgcatggat
tgtaaacgttcaattgaagatagagttgcgaaggttgaagactctttggaacgcagttgt
caatggtgtggtcatattactgacttaatagattgtaggacatgcgaaaaacttttctgt
gcctcatgtataaagaggaatatcggtgaagaatacttgtctgaagctcagtcctctggt
tgggattgttgttgctgctctccaatgcccttgcaaagattgacactagaactggagaaa
gccattagagataagaagtcagtagagttgagttctgattccagctctgattctagctct
gattccagttctgataacaattctgctgatgttaatgtagcaatcagcttaaagaagaaa
tcaaaaaagagaattcggcggataattgatgatgctgaactagggaaagatacgagaaga
aaaattgcaattgaaaaggaacggcaggagcgtcttagatccttgcagttttctgccaga
tacaaaacaattagctctatgggagacctgaaatctattccagaaggtgcggaagttgag
gttcttggtgatgctcacagtggttacatagtgaatgtggctagggagattggtgaagga
gctgtgagagttccttgtagcatatctgccaaactaaaagtccatcaggtaaccgggatt
agatttatgtgggaaaatattattcagtctatcagcagagtaaagtcaggtgataaaggc
cttggctgcattctagctcatacaatgggactgggcaaaacttttcaggttatagcgttc
ctgtacaccgcaatgagatgtgttgatttggggttgaaaactgctcttattgtgactcct
gtaaatgtgttgcacaattggcgaagtgaattcatgaagtggatgccatcagaagtgaaa
ccacttcgcattttcatgcttgaagatgtttcaagggagaggagattggacttgctaaaa
aagtggcgaaataaggggggagttttcttgatgggatatgcagcttttagaaacctgtct
cttgggaggggggtgaaggatttgaatgcggccagagagatctgtagtgccttgagggat
ggacctgatatacttgtttgcgatgaggctcacattatcaagaacaccagggctgacaca
acgcaagctttgaagcaagttaaatgccagagaagaattgccttaactgggtcacccctt
caaaacaatctcatggaatattattgtatggttgattttgtcagagaaggattcttgggg
agtagtcctgagtttagaaatcgcttccaaaatccaatagaaaatggacagcatatgaat
tctactgcggaggatgtaaaaattatgaaccagagatcacacattctgtatgagcaattg
aaaggatttgtgcaaagaatggacatgaatgtggtgaaaaaggatctgccacctaaaaca
gtcttcgtaatatctgtcaagctatcgcccttgcagcggaaattgtatcagagatttctt
aggttatatgggttcagcgatggaagagcagatgaaagaatgagaaaaaacttttttgct
gcttaccaggtcttggctcagattttaaatcatccagggattccgcaattaagaagagag
gatagcaagaatggtcgtcgtggtagcattgttgatattccagatgactgctcaagtgaa
gaaaatacagactacaacatggttacgggagagaaacaaagaactatgaatgatttgcaa
gataaagttgatggctacctccagaaggattggtgggtcgacctacttcaaaaaaataat
tataaggtggcggagtatagcggcaaaatgattttgctattggatattttatccatgtgt
gctgatgtgggggataaggcgcttgtgtttagccagagtatcccgacattggatctcata
gaactatatctttcaagagtacctcggcatggaaaacaaggaaagttctggaaaaaggga
aaagactggtacagaattgatggaaaaactgaaagctcagaacggcagaagttggttgat
aggtttaatgagcctgataacaaaagggtgaaatgcactctaatttcaaccagagcggga
tcgcttggaattaatctttatgctgctaaccgtgtgatcatagttgatggttcatggaat
ccaacctatgatcttcaagctatatttcgagcatggaggtatggtcaaaagaaaccagta
tttgcatacaggttgatggcacgtgggactattgaagaaaagatatataaacgtcaggtg
accaaggaggggctagctgcgagagtggtggatagacaacaagtgcacaggactatctcc
aaagaagagatgttacacctttttgaatttgacgacgatgatgagaaatctgacaccgta
actgagataagcaagcaaaatgacgtggctcaatgcaatctggtggagaattcacagaaa
cagaaggcctcgttacctcgtgttggctgtgacaaattgatggagagcttgctacagcga
cacgggccaaactggatttccaatttccatgagcacgagacattgttacaagagaatgaa
gaggaaagactgacaaaggaagaaaaagacatggcctgggaagtttacaggagagcgctt
gaatgggaagaagttcagcgggtaccacttagcgaatctccagtgctcccaaaaccttct
ccttctgtacaaacagaacccgtacgcatgccaaagttgttcaacagaagtcgttttgtg
attcgtaactgcaccagaactgctcaccagcttactctcataagccaaggaataagagtg
ggcaatagcacgttctgtggggagtgtgggcgcgtgttaacatgggcagacgttttacct
gcagctaaactttcagaggtaaacttactaggaaatgaagattggaaaagaagttggaaa
agaagttga
DBGET
integrated database retrieval system
