Camelina sativa (false flax): 104766887
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Entry
104766887 CDS
T05044
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
csat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104766887
03083 Polycomb repressive complex
104766887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104766887
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104766887
Histone modification proteins
HAT complexes
HATB complex
104766887
HDAC complexes
Sin3A-HDAC complex
104766887
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104766887
PRC2.2
104766887
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104766887
Heterochromatin formation proteins
Other heterochromatin formation proteins
104766887
Chromatin remodeling factors
NuRD complex
104766887
NuRF complex
104766887
NuRF complex (fruit fly)
104766887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
Beta-prop_DCAF12
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
104766887
NCBI-ProteinID:
XP_010489166
UniProt:
A0ABM0XPZ5
LinkDB
All DBs
Position
19:complement(21448235..21452617)
Genome browser
AA seq
503 aa
AA seq
DB search
MESDEAAAVSPQATTPSGGTVASGPKKRGRKPKNKDDSQTPSSQQGGKMKESGKKTSQQQ
PSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLDQATYKNRQRLYLSEQTDGSV
PNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVA
THTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKD
KSVVLWSIQDHITTAGTASGSIVKQTGEGSDKNESPSVGPRGVYHGHEDTVEDVAFSPTS
AQEFCSVGDDSCLILWDARTGTNPVTKVAKAHDADLHCVDWNPHDDNLILTGSADNTVRL
YDRRSLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDMVSKKSG
RAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCETTGGGGTLQIWRMSDLIYR
PEDEVLQELEKFKSHVMTCASKP
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgacgaagcagcagcagtgtctcctcaagcgacgacgccgagcggaggaacc
gtagcttctgggccgaagaagagaggtcggaaacctaaaaacaaggacgattctcagacg
ccgtcgtctcagcaaggtggcaaaatgaaggaaagcgggaagaaaacgtcgcagcagcag
ccgagcgtcgacgagaagtactctcagtggaaaggtctcgtccccattctctacgattgg
ctcgccaaccacaacctcgtctggccttcactctcttgcagatggggtcctcagcttgac
caagcgacctacaagaatcgccagcgtctgtatctctcagagcaaactgatggcagtgtg
cctaatactctggtcatagccaattgcgaagttgttaagccaagggtcgctgcagcagag
cacatatctcagttcaatgaagaagcacgttctccatttgtgaagaagtacaagaccatc
attcaccctggagaggttaacagaatcagggaactcccgcagaacagtaagattgttgct
actcacaccgacagtcctgatgtgctcatatgggatgttgaaacgcaaccaaaccgtcat
gcggtgcttggagctgcaaattcccgaccggatttgatactaactggacaccaagataat
gctgaatttgctcttgcaatgtgcccaactgaaccctttgtgctctctggaggcaaggac
aaatcagttgttttgtggagtatccaggaccacatcacaactgctgggacagcttctgga
tctatcgtcaaacagactggtgaaggtagtgataagaatgagagtccttctgttggcccc
cgaggtgtatatcatggccatgaagatactgttgaagatgtggcattcagcccaacgagt
gcacaagaattctgcagtgttggtgatgattcttgccttatactatgggatgcaagaact
ggcacaaaccctgtcaccaaggttgcgaaggcgcatgatgctgatcttcattgtgtcgat
tggaatcctcatgacgacaatctgatcctgacagggtcagcagacaatactgtccggttg
tatgaccgtaggagccttacctcaaatggagtcggttcgcctatttacaaatttgagggc
cacaaagctgctgttctttgtgttcagtggtctccggataagtcatctgtttttgggagt
tctgcagaagatggtcttttgaacatctgggattatgacatggtcagtaagaagtctggt
cgtgcagctaaaagccctgctggactcttcttccagcatgctggtcacagggacaaagtt
gttgatttccactggaatgcgtcggacccttggactattgtcagtgtttctgatgactgt
gagacgactggtggaggtggaacattgcagatatggaggatgagtgacttgatttacaga
ccagaagacgaagtcctgcaagaactggagaagttcaagtcgcatgtaatgacttgtgcc
tccaaaccttga
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