Camelina sativa (false flax): 104766901
Help
Entry
104766901 CDS
T05044
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104766901
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104766901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_long
PPR_1
HAT_Syf1_CNRKL1_N
DUF4522
Motif
Other DBs
NCBI-GeneID:
104766901
NCBI-ProteinID:
XP_010489180
LinkDB
All DBs
Position
19:complement(21857924..21860791)
Genome browser
AA seq
829 aa
AA seq
DB search
MIVTGACDFSSSLSVASSSSSSSAIAVSPFNVSSLSSNPKFINSSSTLFRSLSFSLIHHR
NSYSRRSLRHLSSHTIHRNKTQFFSKPSPRTPPLFTANSTAQRTGTFVEHLTGITESEEG
SNEANDFGDVESARNDIRNVATRRVETEFEVRELEELPEEWRRSKLAWLCKEVPSHKAVT
LVRLLNAQKKWVRQEDATYIAVHCMRLRENETGFRVYRWMTQQNWYRFDFGLATKLADFL
GKERKFTKCREVFDDILNQGRVPRESTFHILVVAYLSSSVEGCLEEACSVYNRMIQLGGY
QPHLSLHNSLFRALLSKQGGGSLNDHLKQAEFIFHNVVTTGLEVQKDIYSGLIWLHSCQD
EVDKDRINSLREEMKKAGFQESKEVVVSLLRAYAKEGGVEEVEKTWLELLNLDSGIPSQA
FVYKMEAYSKVGDFAKALEVFREMEKHLGGATVTGYHKIIEVLCKFQQVESAESLLKEFV
ESGKKPLLPSYIEIALMYFDLGLHEKLEMAFVECLEKCQPSQTIYNIYLESLVKIGNLEK
AGDVFDEMKNNGTINVNARSCNTLLKGYLDSGKQVRAERVYDLMRLKKYEIEPPLMEKLD
YILSLKRKEVKRPLSMKLSKEQREVLVGLLLGGLQIESDKEKKSHMIKFEFRENSQAHLV
LKHHIHDQFREWLHPLSDFQEDIIPFEFYSISHSFFGFYADHFWPKGQPEIPKLIHRWLS
PHSLAYWYMYSGFRTSQGDIILRLKGSLEGVEKVVKALRGKSMECRVKKKGKVFWIGLQG
TNSALFWKLIEPHILEDLKDHLKPASESMGNDGEAEEQSINIESSSLSQ
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcaccggagcttgcgacttctcttcatcactctccgtcgcctcttcctcctcc
tcctcctccgccatcgccgtctcacccttcaacgtttcatctctctcctctaaccccaaa
ttcatcaattccagctcaactctcttccgttccctttccttctcccttatccaccaccgc
aacagctactcacgccgctctctccgccacctctcctctcatacaattcaccggaacaaa
acccaattcttctccaagccttctccgcggactccaccacttttcacggctaattccaca
gctcaacgaaccgggactttcgtcgaacaccttacaggcattacagaatcggaagaagga
agcaatgaagccaacgatttcggtgatgtggagtctgccaggaacgacattagaaacgtt
gcgactcgtagagtggaaacggagtttgaagtgagagaattggaagagttgccggaggag
tggcgacggtctaagcttgcgtggctgtgtaaagaggtcccatcgcataaagccgtaacg
cttgtgaggctcttgaatgctcaaaagaaatgggttcgtcaagaagatgctacttacatc
gctgttcattgtatgcggcttcgtgagaacgaaactggattcagggtgtatagatggatg
acacagcagaattggtacaggtttgattttgggttagccaccaagttagctgatttctta
gggaaagaacgaaaatttacgaaatgccgagaagtgttcgacgatattttgaatcaaggg
cgtgttccaagagagtctacatttcatattcttgtagttgcatatctaagtagctcagta
gaaggctgtctcgaagaagcgtgtagtgtttacaacagaatgattcagcttggagggtac
caaccgcatcttagtctacataattctttatttagagctctcttgagcaaacaaggagga
gggtctttgaatgatcaccttaagcaagctgagtttatcttccacaatgttgtgacaact
gggcttgaggttcagaaggatatttatagtggattgatctggctgcatagttgtcaagac
gaagttgacaaagataggataaattctttaagagaagagatgaagaaggcggggtttcag
gaaagtaaagaagttgtggtctcgttactgagagcatatgcgaaagagggaggtgtggaa
gaagttgagaagacatggcttgaattgcttaatctagattccggtataccttctcaagcg
tttgtttataaaatggaagcttattcaaaagttggcgattttgcaaaagctctggaggta
tttagggagatggagaagcatctaggtggtgcaactgttactggataccacaaaatcatt
gaggttctatgtaaattccagcaagtggaatctgcggaatctctcttaaaagagtttgta
gaaagcgggaagaagccgctcttaccttcatacatcgagatagccttaatgtacttcgat
ttaggtttacatgagaagttggagatggcttttgttgagtgcttggagaaatgtcaacct
agccagaccatatataacatatacttggagtcactggttaagatcggcaaccttgagaaa
gcaggggatgtctttgatgaaatgaagaacaacgggactatcaatgtgaatgctagatca
tgcaacacccttttaaagggatacctagatagtggaaaacaagtgcgggcagagagagtt
tatgatctgatgagattgaagaaatatgaaatcgaaccaccgctcatggaaaagcttgat
tacatcctgagcttgaagagaaaagaggtgaagagaccgttgagcatgaagctaagcaaa
gaacaacgtgaggtattggtaggtttgctgttaggtggcttgcaaatcgaatcagacaaa
gagaagaagagccacatgatcaaatttgaattcagagagaattctcaggctcatctggtt
ctgaaacaccacatacatgaccagttccgcgagtggttgcatcctttgagcgattttcag
gaggatattataccgttcgaattctactccatttcccattcattctttgggttttacgct
gatcatttctggccaaagggtcagccagagattccaaaactgattcaccggtggctctca
ccacactcacttgcttactggtacatgtacagcggctttagaacatcgcaaggtgacatt
atcttgagattgaagggaagtctagaaggtgttgagaaggtagtaaaggctctgagaggc
aaatctatggagtgccgggttaagaagaaaggaaaagtcttctggatcggactacaagga
acaaactcagcgttgttctggaaactaatagagcctcacatattggaggacttgaaagat
catttgaaacctgcttctgaatcaatgggcaatgatggggaagcagaagaacaaagcatc
aacattgaatcaagctctttatcacagtga
DBGET
integrated database retrieval system
