Camelina sativa (false flax): 104766939
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Entry
104766939 CDS
T05044
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104766939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104766939
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104766939
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_16
Motif
Other DBs
NCBI-GeneID:
104766939
NCBI-ProteinID:
XP_010489214
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Position
19:22374780..22379518
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AA seq
917 aa
AA seq
DB search
MEILQPDQAYSNGYYKSMRKRKLNQVDDGVHVGSVTPGAKRVKSSSKVVDFSQPFAVSNM
LQALEGGRFGSVTKELQEIADLRMDLVKKCIWLYPSLADTEFGGGKNQTIELENQQVVEA
DVINLDDDAVSSKALCVVPSSEIVNLDSDDEGNESTRPKYQFQSSLVLHQMSQGDLTPVT
PQLNFEEVNLGRGMEMPSAIKRIEMPSAFKDMEMPSAIKDMVEGQTSRDKVLPIENGMVN
DKGVYVGVEEDDSDNESKSGDEDLGDIWNEMAMSIVCSKDVAGETSQKEPKADVVEDCEH
SFILKDDMGSVCRVCGVIEKSILDIIDVQFTKAKRNTRTYASETRNKRSGESDVELKLSE
EGLMIGGLSAHQVHANKMKPHQVEGFQFLCSNLVADDPGGCIMAHAPGSGKTFMIISFMQ
SFLAKYPQAKPLVVLPKGILSTWKKEFVRWQVEDIPLLDFYSAKADNRAQQLAILKLWME
KKSILFLGYKQFSTIVCDDASSESRSCQEILLKAPSILILDEGHTPRNEDTNILQSLAQV
QTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLDTSKSVVKRILSRAPSGVKGRLTGNS
NSDMASVFNETVEHTLQKCEDFKVKIAVIQDLREMTKKVLHYYKGDFLDELPGLADFTVV
LNLSPRQLNEVKKLRHEKRKFKVAAVGSAIYLHPKLKVFSDKSNVRDETMDQMLEKLDVN
EGVKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAAVAKGWKEGTEVFVLTGETNS
EDRERSMENFNNSPDAKIFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRAFRP
GQKKMVHAYRLIAGSSPEEEDHNTCFKKEVISKMWFEWNEYCGYRNFEVETIDVDEAGDK
FLESPALREDIRVLYKR
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggagatcctccagcccgatcaagcttactctaacgggtactataagagtatgcgtaaa
aggaagctgaatcaagttgatgatggagtccatgttgggtctgttacacctggagcaaag
cgggttaagagctcatccaaagttgttgatttttctcagccatttgctgttagcaacatg
cttcaggctttggaaggtggtagatttgggagtgttacgaaagagttgcaagagatagct
gatctgaggatggatttagttaagaaatgtatttggttatacccatctctagcggatact
gaatttggaggaggtaagaatcagacgattgagttggaaaatcaacaggttgtggaagcc
gatgtcatcaatttggatgatgatgctgtttcaagtaaagctctctgtgtggttccttca
tccgagattgtgaatcttgattctgatgatgagggcaacgagagtacgaggcctaagtat
cagtttcagtcaagtcttgtgctgcatcagatgagtcaaggggatttgacaccagtaaca
ccgcaactcaatttcgaggaggtcaatttagggaggggcatggagatgccttctgccatc
aagcgcattgagatgccttctgccttcaaggacatggagatgccttctgccatcaaggac
atggtggagggacaaacaagtagagataaagtacttcccatagaaaatggtatggttaac
gataaaggtgtctacgtgggcgttgaggaggatgacagtgataatgagtctaaatcagga
gatgaggatcttggtgatatctggaatgaaatggccatgtcaatagtgtgctccaaggat
gtagccggggagacttcacaaaaggaaccaaaggcagatgtagtggaagactgtgagcac
tcgtttattctaaaggacgatatgggttctgtttgccgtgtctgtggagttattgagaaa
agcatattagatataatcgatgtgcaattcactaaagcaaaaagaaacacgagaacatat
gcttctgaaacccggaataaaaggtctggcgaatctgatgttgaacttaagttatctgaa
gaagggctgatgataggtggactttctgctcatcaagtgcatgctaacaaaatgaagcct
catcaagttgagggattccagttcctttgcagcaatttagtggcagacgatcctggtggt
tgtatcatggctcatgctccaggttctggaaaaaccttcatgattatcagttttatgcag
agctttcttgcaaagtatcctcaggctaagccactggttgtacttccaaagggaattcta
tctacttggaaaaaagagttcgtgagatggcaagttgaggacataccgttgcttgatttc
tatagtgctaaagcagataaccgtgcacagcagctggctattttaaaactgtggatggag
aagaagagtatcttatttctcgggtacaagcagttctcaactattgtgtgtgatgatgca
agtagcgagtcacgttcttgccaggagatattgctcaaagcaccttcgatcctcattttg
gatgaaggacacactccaaggaatgaagacactaatatactgcagtcccttgcccaagtc
caaacaccaagaaaagttgtcctctcaggaacgctttatcagaaccatgtaaaggaggtt
ttcaacattctgaaccttgttcgaccgaagtttctcaaattggatacctccaaatctgtt
gtgaagaggatattgagtcgtgctccatctggtgtcaaggggagacttactggaaacagc
aattcagacatggcttcggtgttcaatgaaactgtggaacacaccctgcagaagtgcgag
gatttcaaggtgaaaattgccgtaatccaagatttgcgggagatgaccaagaaggtgctt
cattactataaaggagatttcttagatgagcttcctggacttgctgatttcactgtggtt
cttaatctgtctccaaggcagttgaacgaagtgaagaagttaaggcatgagaagagaaaa
tttaaggttgctgctgtgggaagtgcaatttaccttcacccgaagctgaaagttttctct
gacaagtctaatgtccgtgatgaaactatggaccaaatgctagagaagctagatgtgaat
gaaggcgtcaaagcaaagttcttccttaacttgataaacctgtgcgactcagctggtgaa
aagctcttggtgttcagccagtatctcattccactgaagtttcttgaaagactagctgct
gtagctaagggatggaaagaagggacagaagtttttgttcttacaggcgagaccaattct
gaggatcgtgagcgttcaatggaaaattttaacaattcgccagacgccaaaatcttcttt
ggttcgataaaagcatgtggagaaggtatttcgcttgttggagcatctcgcatactaata
ttggatgttccgctgaacccttctgtgacccgccaagctattgggcgagcgtttcgacct
ggacaaaagaagatggtgcatgcatacagattgattgctgggtcatcacctgaggaagag
gatcacaacacttgcttcaaaaaggaagttatctcaaagatgtggttcgagtggaacgag
tactgcggctaccgaaactttgaggtagagactatcgatgtggatgaagctggtgataag
ttccttgaaagtcctgccttaagagaagacataagagttctctacaaaaggtaa
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