Camelina sativa (false flax): 104766973
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Entry
104766973 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104766973 isoform X1
KO
K14962
COMPASS component SWD2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104766973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104766973
03036 Chromosome and associated proteins [BR:
csat03036
]
104766973
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104766973
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
104766973
COMPASS/SET1 complex (yeast)
104766973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
104766973
NCBI-ProteinID:
XP_010489245
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All DBs
Position
19:22921386..22923411
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AA seq
173 aa
AA seq
DB search
MIIGSLATLKGIKTGLYRFVCLLMSASLDRSVILWDLRVNACQGILHLRGRPAVAYDQQG
LVFAIAMEVGAVKLFDSRCYDKGPFDTFLVVLIILHLPQMGSRCSKHLRFHLLNLYPKMK
TYCEVVASMDVPCEGSKLKPHFCKTTYRLYQFKPKLMPSPSERYRMWRGGRTI
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgataatcggatccttggctactttaaagggcataaagacagggttgtatcgctttgta
tgtctcctcatgtctgcttctctcgaccgaagtgtcatactctgggatcttcgtgttaat
gcctgccagggaattctacatcttcgtggtaggcctgcagttgcgtatgaccaacaaggc
ctggtgtttgctattgcaatggaagtaggtgctgttaagttgtttgattcccggtgttat
gacaagggtccgtttgacacatttctggtggtgttgattattctacatttacctcagatg
ggttctcgatgttccaagcatttaaggttccatctcctgaacctgtatccgaaaatgaaa
acttattgtgaggtggtggcttctatggatgtaccttgtgaaggctccaaactaaaacca
catttctgcaaaacaacataccggctttaccaatttaaacctaaacttatgccttctcca
agcgaaagatacagaatgtggcgaggtgggagaacaatatag
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