Camelina sativa (false flax): 104766988
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Entry
104766988 CDS
T05044
Name
(RefSeq) pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104766988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104766988
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19-related factors
104766988
Complex C
104766988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
104766988
NCBI-ProteinID:
XP_010489283
LinkDB
All DBs
Position
19:complement(23129096..23138083)
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AA seq
309 aa
AA seq
DB search
MVNARRVHPDCINASNPYHECVEFCFKKIAEVKARLEEENAGLVEAVGGGGHPNAKVLEQ
ARDSLDDKRIEEVSSEEEEEEEDNQEPEIDVTQLTGRKKKLFELRLKMNEARKSNQTDVG
SEKKKMEAPTETKGISKQKWLEERKKKIGKLLDANGLDLTKAYMLDTQEAAESKYKKWEK
EPTPAGWDVFNQKTLYNAYKKRTKNIKVDLEEYNRMRAADPEFYREASSLQYGKAPKTSQ
DKIDKMAKELFDREQKRQEFSRRRKFREEKDIDSINDRNEHFNKKIERAFGKYTLEIKNN
LERGTALPD
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgcgagaagagtgcatccggattgtataaatgcttcgaatccttatcacgag
tgtgtcgagttttgctttaagaaaattgctgaagtgaaggcaagattggaggaggagaat
gcaggattagttgaagctgtcggtgggggtggtcaccctaatgctaaagttcttgagcaa
gcgagggattcgctcgatgataaaagaatagaggaagttagttctgaagaagaagaggag
gaagaggataaccaagaacctgaaattgacgtgacccaacttactgggaggaagaagaag
ttgtttgagttgagacttaagatgaatgaagctagaaaatccaatcagacggatgtcggg
agtgaaaagaagaaaatggaagcaccaacagagacgaaaggaatctcaaaacagaaatgg
ttggaggagaggaagaaaaagattgggaaacttctcgatgccaatggtttagatctgaca
aaggcttatatgctcgatactcaagaagcagcagaatcaaaatacaaaaaatgggaaaag
gaacctacgcctgctggttgggatgtctttaaccagaagacattatacaacgcatataag
aaacggacaaagaacattaaggttgatctagaggagtataacagaatgagagcagctgat
ccagagttttaccgtgaggcctcaagcttgcaatatggcaaggctccaaaaacttcgcaa
gataagatagacaagatggcaaaagagctcttcgacagagagcaaaagcgacaagagttt
agcaggaggagaaagttccgggaagagaaggatatcgattccatcaacgacagaaacgag
catttcaacaaaaagatcgagcgtgcgtttgggaaatacacgttggagatcaaaaacaac
ttggagcgaggaactgcgttacccgactaa
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