Camelina sativa (false flax): 104767225
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Entry
104767225 CDS
T05044
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 4-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00900
Terpenoid backbone biosynthesis
csat01100
Metabolic pathways
csat01110
Biosynthesis of secondary metabolites
Module
csat_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
104767225
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csat01006
]
104767225
Enzymes [BR:
csat01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
104767225
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
104767225
2.5.1.29 geranylgeranyl diphosphate synthase
104767225
Prenyltransferases [BR:
csat01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
104767225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
104767225
NCBI-ProteinID:
XP_010489569
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All DBs
Position
19:complement(26178796..26179905)
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AA seq
369 aa
AA seq
DB search
MEAQTIFLYLLLFLLSLHFVFTTLKGRLSPTSTRWLIRLLHLPIKSPVAATVFARKDVRE
FLDSSVQLENKEKDDFDFKTYMISKAESINRALDEAIPLIEPLNIHNAMRYAVLAGGKRV
RPMLCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGE
SVAILSGGALLALAFEHLTEADVSSKKLVRAVKELAKSIGTKGLVAGQAKDLSSEGLDQN
DVGLEDLEFIHVHKTGSLLEASAVIGAVIGGGSEEEIERVRSFARCIGLLFQVVDDILDE
TKSSEELGKTAGKDQIAGKLTYPKVIGLEKSKEFVNKVKRDAREHLQGFDSDKVKPLIAL
TNFIANRNN
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggaagctcaaaccatctttctctatcttttactcttccttctatctctacactttgtg
tttacaactctgaaaggacggctgagtccgactagcacacggtggctgatccgtcttctc
cacctcccgatcaaatctccggtcgccgccactgttttcgcaagaaaagacgttcgtgag
tttcttgattcatcagtccaattagaaaacaaagaaaaggacgatttcgatttcaaaacg
tacatgatcagcaaagcagagtcaataaacagagcgttagacgaagccattccactcatc
gagccactcaacatccataacgcaatgcgttacgcggttctcgcaggtggcaaacgcgtc
cggccaatgctatgcctggccgcttgcgagctagtgggcggggaagagcgtttggcgatt
caagcggcttgtgcggtagagatgattcacacaatgtctctcatcaaagacgaccttcct
tgtatggacaatgacgatctacgacgaggtaaaccaactacacacaaagtcttcggagaa
agcgtggccatcctctccggcggcgcacttttagccctagctttcgagcatttgaccgaa
gctgacgtgtcatccaagaaattggttagggccgttaaggagttggctaagtctattgga
acgaaaggactcgtggcgggacaagctaaggatttgagcagtgaagggttggatcaaaac
gacgttggtttagaggatcttgagtttattcatgttcataaaaccggttcattgctagaa
gcatcggcggttatcggagcggttattggtggtgggtcggaggaagagattgaaagagtg
agaagctttgcgaggtgtattggattgttgtttcaagtggttgatgatattttggatgag
acgaagtcgtcggaggaattaggaaaaaccgccggaaaagatcagatcgccggtaagctg
acgtatccgaaagtgattggtctagagaaatcgaaggagtttgtgaataaggtgaagaga
gatgcgagagaacatcttcaagggtttgattcggacaaagtgaaacctttgattgctctt
accaacttcattgccaatagaaacaactga
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