Camelina sativa (false flax): 104767461
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Entry
104767461 CDS
T05044
Name
(RefSeq) rRNA biogenesis protein RRP5-like
KO
K14792
rRNA biogenesis protein RRP5
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104767461
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
Other 90S particles
104767461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
NRDE-2
UTP6_C
Motif
Other DBs
NCBI-GeneID:
104767461
NCBI-ProteinID:
XP_010489787
LinkDB
All DBs
Position
19:complement(5440170..5455389)
Genome browser
AA seq
1892 aa
AA seq
DB search
MGVPSKKIANGKRHDSTKSFKPTKKPFKKTKDDLAARSEAALQLEDVPDFPRGGGSSLSR
KEREKIYEEVDAEFDADERVSKKSKGGKSKKKKIPNDADDLGLLFGGLTGKRPRYANKIT
TKNISPGMKLWGVVTEVNQKDIVISLPGGLRGLVRASEASDFTDLGIEDDENELLGDIFS
VGQLVPCIVLQLDDDTKEAGKRKIWLSLRLSLLHKGFSFDSFQLGMVFSANVKSVEDHGY
ILHFGLPSITGFIEICDDGNQKSGMKTGQLIQGVVTKIDRERKIIRLNSDPDSVAKCLTK
DLNGMVDLFHLKNPLSNKSWKDEYSQNKTVNARILFIDPSSRAVGLTLNPHLVCNKAPPL
HVSSGGIFDEAKVVRIDKSGLLLELPSKPASTPAYVSTYDAAGDEVKKLEKKYKEGNHIR
VRILGLKQMEGLAIGTLKESAFEGPVFSHSDVKPGMVTKAKVISVDSFGAIVQFPGGLKA
MCPLRHMSEFEVTKPRKKFKVGAELVFRVLGCKSKRITVTYKKTLVKSKLPILGSYTDAT
EGLVTHGWITKIEKHGCFVRFYNGVQGFVPRFELGLEPGSDPDSVFHVGEVVKCRVTSAA
HGSRRITLSLMIKPASVSEDDSIKLGSIVSGIIDSITSQAVIVRVKSKGVLKGTISAEHL
ADHHEQAQLMKSLLRPGYELDKLLVLDIDGNNLALSSKYSLIKLAEELPSEFNQLQPNSV
VHGYVCNLIENGCFVRFLGRLTGFAPRSKAIDEPRADLSESFFVGQSVRANIVDVNQEKS
RITLSLKQSSCASVDASFVQEYFLMDEKILDLQSSDITKSECSWVEKFSIGSLMKGTIQE
QNDLGVVVNFKNINNVLGFIPQHHMGGATLVPGSVVTAVVLDLSRAERLVDLSLRPELIN
NLNKEVSNSQSKKKRKRGISKELEVHQRVSAVVEIVKEQYLVLSIPEHDYTIGYASVSDY
NTQKLPVKQFSTGQSVVASVEAVQNPLSSGRLLLLLDSVSGTSETSRSKKAKKKSSCEVG
SVVHAEITEIKPFELRVNFGHSFRGRIHITEVNDVSTSEEPFAKFRVGQSVSARVVAKPC
HTDIKKSQLWELSVKPAILRDSSELKGIQESEQLEFSAGQCVSGYVYKVDKEWVWLAISR
NVTARLFILDTASEAHELEEFERRFPIGKAVSGYVLTYNKEKKTLRLVQRPLPDIHKSIA
NGVGSKMDKLDSSIPCDDGTLFIHEGDILGGRISKILPGVGGIRVQIGPYVFGRVHFTEI
NDSWVPNPLDGFREGQFVKCKVLEISSSSKGTWQIELSLRKSLDGMSSDHLSEDCSNNDN
VCKRFARIEDLSPDMGVQGYVKNTMSKGCFIILSRTVEAKVLLSNLCDSFVKDPEKEFPV
GKLVTGRVLNVEPLSKRIEVTLKTVNAGGQPKSESYDLKKLHVGDMISGRIKRVEPYGLF
ITIGQTGMDGLCHKTQLSDDGIENIQARYKAGESVTAKILKLDEEKQRISLSMKSSYLMS
GDDVDAQPPSEENANETSMECDPINDPKSGVLVAVSDFGFQETSAGKHSGTSVVLAQVES
RASIPPLEVDLDDIEETDIDNGQNHGKLQGADKDEKSKRREKQKDREEREKKIQAAEGRL
LENHAPESADEFEKLVRSSPNSSFVWIKYMAFMLSLADIEKARSIAERALRTINIREEEE
RLNIWVAYFNLENEHGSPPEEAVKKVFERARQYCDPQKVYLALLGVYERTEQHKLADKLL
DEMIKKFKQSCKIWSRKIQSSLKQNEEGIQSVVNRALLCLPRHKHIKFISQTAILEFKCG
VADRGRSLFEGVLREYPKRTDLWSVYLDQEIRLGEVDVIRSLFERAISLSLPPKKMKFLF
KKYLEYEKSVGDEERVEYVKQRAMEYADSTLA
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaccgtcgaagaaaattgctaatggaaaacgtcacgattctacaaagtccttt
aaaccaacgaagaaaccgtttaagaagacgaaggacgatttagctgctaggtctgaagcc
gctctacagctcgaagatgttcctgacttccctcgaggtggaggtagttctctgagtaga
aaagagcgtgagaaaatttatgaagaagtggatgctgagtttgacgctgatgagcgtgtt
tctaagaagagtaaagggggaaagtctaaaaaaaagaaaatccctaacgatgcagacgat
ttgggattgctttttggcggccttactggcaaaaggccaagatatgccaataagattacc
actaagaatatttcccctggaatgaagctttggggagttgttactgaagtaaaccagaag
gatattgtaattagtcttccaggaggattacgtggattagtccgcgcaagtgaggcgtca
gattttacagatcttgggattgaggacgatgaaaatgaactccttggagacattttttca
gtgggtcagcttgttccctgcattgtattgcaattagatgatgatacgaaggaggcgggc
aaaagaaaaatatggctttcattgcgactttctttattgcacaagggattcagttttgat
tcttttcaactagggatggttttctctgccaatgtgaaaagcgtcgaagaccatggttat
atacttcactttggattaccttctatcacaggatttatcgaaatatgcgatgatggaaac
cagaagtcaggaatgaagactgggcagcttattcagggtgtggttacaaagatcgataga
gaacgtaaaattattcgtcttaattctgacccagattcagtggcaaagtgtctgaccaag
gatcttaatggcatggttgatctcttccatctaaaaaatccattgtctaacaaaagctgg
aaggatgagtatagtcagaataagacggttaatgctagaatattgtttatcgatccatca
tctagagctgttggtttaacattgaaccctcatcttgtttgtaacaaggctcctccgttg
catgtttccagcggcggcatattcgacgaagcaaaagtagttcgtattgataaatcaggc
cttcttctggaacttccttctaagcctgcatcaactccagcatacgttagcacatatgat
gccgcaggagatgaagtaaagaaactggaaaagaagtataaggaaggaaatcacatccgt
gttcgaatactcggccttaagcagatggaggggttggccatagggactctaaaggaaagc
gcctttgaaggtccagttttctcccactcagatgtcaagcctggtatggtgacaaaggcc
aaagtcatatctgttgattcatttggtgccattgtgcaatttcccggtggtctcaaagcg
atgtgcccacttcggcatatgtctgagtttgaagttacgaagccgaggaaaaaattcaag
gttggagctgaattagtattccgtgtgcttggctgcaagtcaaagagaataactgttacc
tacaaaaaaactcttgtgaagtcgaaacttccaattttgggttcttacactgatgcaact
gaaggtctagtgacgcatggctggataacaaagattgaaaagcatggatgctttgttcgc
ttttataatggagtgcaaggatttgttcccagatttgaacttggtttagagcctggaagt
gatccagattccgtgtttcatgtcggagaggttgtcaaatgtagagtaaccagtgcggct
catggttctcgaaggatcacccttagtttgatgataaagccagcaagtgtttctgaagac
gattcaatcaagttaggtagcattgtatctgggataattgatagtataactagtcaggca
gtcattgtccgtgttaaatccaaaggtgttctcaagggtacaatttctgctgaacattta
gctgatcatcatgagcaagcacaattaatgaagtcacttttaagacctggatatgagctt
gataagctgctggtactagacattgacggcaacaacttggccctctcttcaaaatattct
cttataaagttagctgaagagcttccttcggaatttaaccagctccagccaaactcagtg
gttcatggttatgtttgtaacttgattgaaaatggctgctttgtccgttttcttggtcgt
ctgactggcttcgccccaagaagcaaggcaattgacgaacccagggcagatctgtcagaa
tccttctttgttggacaatcggttcgggctaatatagttgatgtcaatcaagaaaaaagt
aggataactctttcattgaaacagtcatcttgcgcatctgtagatgcttcttttgtccaa
gagtacttcctcatggatgagaagatattagacctgcagtcatctgatattactaaaagt
gagtgtagctgggttgagaaattctccattgggagtttgatgaagggaaccatacaggaa
caaaatgatctgggtgtggtggtgaattttaaaaatattaataacgtccttggttttata
cctcagcatcatatgggtggagctactttggtacccgggtctgttgtcactgcagttgtt
cttgatctttctagggcagagagactagtcgatttgtctttgaggcctgagctcataaac
aacttaaataaggaggtctccaacagtcaatcaaaaaagaaacgtaaaagaggaatctcc
aaggaacttgaagtccaccagagggtcagtgctgttgtagagattgtgaaggagcaatac
ttggttttgtcgattccagagcatgattacactataggatatgcatcagtatcagactat
aacacacagaagttgccagtgaaacaattttccactggacaaagtgttgttgcttctgtt
gaggctgtgcaaaaccctttatcctctgggaggttgcttttacttcttgactctgtttcc
gggacttctgagacttcccgttctaagaaggcaaagaagaaatccagctgtgaagttggt
tctgttgtccacgctgagattactgaaataaagccttttgaacttagagtaaactttggc
cacagtttccgaggaagaatccatataactgaggtaaatgatgttagtacaagtgaagaa
ccttttgccaaattcagagtcgggcaatcagtgtctgcaagggttgttgcaaaaccgtgt
catactgatattaagaagagtcaactttgggagctctctgtaaagcctgcaatccttaga
gattccagtgagttgaaaggtatacaagagagtgaacaacttgaattttctgctggacaa
tgtgtcagtggatatgtctacaaagtggataaggaatgggtttggttagcaatatctcgc
aacgtgacggcacgcttgttcattttagacacggcatccgaagctcatgaacttgaggag
tttgaaaggcgttttccgattggtaaagctgtttcaggttatgttttgacgtacaataaa
gagaaaaaaacattacggttggttcagcgtccactacctgatatccacaaaagcatcgcc
aatggtgtaggcagcaaaatggataaactagacagtagcattccttgtgatgatggtact
ctttttattcatgaaggagacattctgggtggaagaatttctaagatacttcctggtgtt
ggtggaattcgtgtgcaaataggtccttatgtatttgggagagttcattttactgaaatc
aatgattcatgggtccccaatccattagatggtttccgtgaaggccagtttgtgaaatgc
aaggtcttagaaatcagcagttctagtaaagggacttggcaaattgaactctcattacgg
aaatcactagatggcatgagttctgaccatctctcagaagattgtagtaataatgacaat
gtttgcaagcgtttcgcgaggattgaagatctttctcctgatatgggcgtccagggttat
gtcaaaaatacaatgtcgaaaggttgttttattatactttcaaggacagtcgaggcaaaa
gttctactttccaatctatgtgatagttttgttaaggatcccgaaaaggaattcccagta
ggaaaacttgtaactggcagggttttaaatgtggagcctttatctaagcggatagaagtc
actttgaagacagtaaatgctggtgggcagccaaaatctgagtcttatgacttgaagaaa
ctccacgttggagatatgatttctgggagaatcaaacgtgtggagccctatggcttattc
attaccattggtcaaactggcatggatggattatgtcacaaaacacagctttccgatgat
ggtatcgagaatatacaagctagatataaggccggagagagcgtcaccgcaaaaattttg
aagcttgacgaggaaaagcaacgtatatcgctcagcatgaagagttcttatcttatgagt
ggtgatgatgtcgacgcacagccaccttctgaagagaatgctaatgaaacaagcatggaa
tgtgatccaatcaatgatccgaagtcaggagtacttgtagcagtcagtgattttgggttc
caggaaacaagcgctggaaaacatagtggaacctctgtggttcttgctcaagtagagtca
agggcttctatccctccgcttgaggttgaccttgatgacattgaggagacggacattgac
aacggtcagaatcatggaaaactacagggagctgataaagatgaaaagagcaagagaagg
gaaaagcaaaaagacagggaggaaagagagaaaaaaatacaagctgctgaaggaagattg
ctggagaatcatgcacctgagagtgctgatgagtttgagaaattggttagaagctctcca
aacagcagctttgtctggataaaatatatggcgttcatgctcagcttggctgatattgag
aaagccaggtcaattgctgagagggctttgaggactataaatatccgtgaggaagaagaa
aggctaaacatatgggttgcttacttcaatttggaaaatgaacatggaagtcctccagag
gaagctgttaagaaagtgtttgagagggcccgtcaatactgtgacccccaaaaagtttac
cttgcactcttgggcgtgtatgagagaacagagcaacataaattggctgataagctgctt
gatgagatgattaagaagttcaagcaatcttgcaagatttggtcaaggaaaatacaaagt
tctctaaaacaaaacgaggaaggcattcaatccgttgtgaatcgtgccttgctatgtctt
ccacgccataagcacattaagttcatatcacagactgctatccttgagttcaaatgtgga
gttgcggatagagggagatcactatttgaaggcgttcttagggaatacccgaaaagaaca
gacttgtggagtgtatatctggaccaagagatccggctgggagaagtggatgtaattaga
tctttattcgagagagccattagcttgagcttgcctcctaagaagatgaagttcttgttc
aagaagtacttggaatatgagaaatctgtaggtgacgaagagagagtcgaatacgtgaaa
cagagggcgatggagtatgcagacagtaccttagcctga
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