Camelina sativa (false flax): 104767661
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Entry
104767661 CDS
T05044
Name
(RefSeq) AP-5 complex subunit beta-1-like
KO
K19022
AP-5 complex subunit beta-1
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104767661
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
104767661
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
RPAP3_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
104767661
NCBI-ProteinID:
XP_010489956
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Position
19:10302115..10307995
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AA seq
1084 aa
AA seq
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MTTTTTPEKTPARPLSIQDWDVLIDDFRDDGAPRDWFTSVFQIDSLADLALSSLLKKDFP
ITVKLSILVFLDEFSPILFDKCGNDTFDRFIDVLRAIVQSPTDGSSGLKEQAMVSFTSVI
VSIDSFSLGHVEAVVDLLLALVNRPNHGFDRQARAVACECLRQLEKAFPGLLSDVAGHLW
SLCQAERTHAVQAYLLLFTTIVYNVVHQKLKVSLLSTSVPLVPFNAPNWMRDQSLVMSQG
HLGLGPDQKELRRTLAFMLESPYLFTSCAMMEFMGMVVPLASALELQASMLRVQFLGMIY
SFDPMLCHVVLLMYTQFPDAFEGQEKEIMRRLMLFSKETQIYLVFRLLALHWLMGLLNKL
MLSGELEKRKSVLEMGQKFHPVVFDPLALKALKLDLMVQCSVNSNALSGGDNSKSAGDLL
QECLVSVSDFKWLPPWSSETELAFRTLHKFLICSSTHSDTDPSTTRSLMESSLFQNVQGL
LVDMTLEFQILVPVIVAFIERLINCHKHQWLGERFLQTLDEKLLPKLMKNNLLTAYFPLF
HRIAENDTIPPSRLIELLTKFVISLVEKRGFDLSLTCLYFPDLEVRDNARIYLRMLVCIP
GQRIKNILKPADAVSPSAHSSTFFSVQSPRFRHDPSKSRNLSAYILLERVTPLLVKQSWS
LSLPSLTVGTGGYSIIENKIEVDEVEPDDSQELQILPEARRIESGKPTLRVMDSKIGEIL
ERLRRYFSVIPDFKHMPGIKVRITCTLRLDAEPYSSVWGSETQNVELEKVDSPPAIFASV
LKFSSSAPYGSIPSCRIPFLLGEPHSNSNVPNEEVSLDIVLLENTLKEEEKDCLRGGAPV
TVELEPKEPTPGLVEVSVEANAENGQMIQGKLESVPVGIEDMFLKALAPPGEPEDTMPSY
YSDLFSALWEVCGSSSSTAHETFALKGGKTAAAVSGTRSVKLLEVPAETVIQATELRLAP
FVVAISGDQLVNIVRDGGIIENIVWKEEEEEGNHANAEQSSSSSVGIRGPLRLTYIGYGD
DQEVPMTRSRGKMGKVKMLMFLPPRYHLLFEMEVGEGSTLVHIRTDYWPCLAYVDDYLEA
LFLH
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgacgacgacgccggagaagactccggcgagacctctctcaatccaggactgg
gacgttctcatcgacgacttccgagacgacggcgctcctcgcgactggttcacttccgtt
ttccagattgattctctggcggacttggctctctcgtctctcctcaagaaagacttccct
atcactgtgaagctctcaatccttgtctttctcgacgagttctccccaattttgtttgat
aaatgtggtaacgatacctttgatcgattcatcgatgttctccgtgcgatcgtgcaatca
ccgacggatggatcgtcgggattgaaagagcaagctatggtctctttcacctctgtgatt
gtatcgattgattctttctctctaggtcacgtcgaagcggttgttgatttgcttcttgct
ctcgtgaatcgtcctaaccacggatttgatcgacaagctcgtgccgtcgcttgtgagtgt
ttacgtcagcttgagaaagcttttcctggtttgttatctgatgtagctggtcatctttgg
tcgttgtgtcaagcggagagaactcacgctgtgcaagcttaccttctcttgttcactacg
attgtttacaacgttgttcatcagaagcttaaggtttcgcttcttagtacctctgtacct
ttggttcctttcaatgctcctaattggatgcgtgatcagagtttggttatgagccaaggt
catctaggattggggccagatcagaaggagctgagacgaacgctggcttttatgttggag
tctccgtatttgtttacgtcttgtgctatgatggagtttatgggtatggttgtgccactt
gcatcagcattggagttacaggcttctatgctgagagttcagttcttggggatgatttat
tcgtttgatccgatgctttgtcatgttgtcttgcttatgtatactcagttccctgatgcg
tttgagggacaagagaaagagatcatgagacgtcttatgctcttttctaaggagactcag
atctatcttgttttccgcttgcttgcgctgcattggttgatgggtttgttgaataagctt
atgttgagtggggagcttgagaagaggaaatctgttcttgagatgggtcagaagtttcat
cctgtggtttttgatccactcgctttgaaagcgttgaagcttgatctgatggtacaatgt
tctgttaattccaacgctttgagtggaggtgataacagcaaatctgctggggatttgttg
caggaatgcttggtatcggtttcggatttcaaatggttgcctccatggagctcagaaact
gaactagcattccgcactttacacaagtttctgatatgttcatctacacattccgacact
gacccttccaccactagaagtcttatggagtctagcctcttccaaaacgtgcaggggttg
ctggtagacatgactttggagtttcaaatcttggtccctgttattgtggcttttattgag
cggttgataaactgtcacaagcatcagtggttaggagagcggtttcttcagactctcgat
gagaaactgcttcccaaacttatgaaaaacaacttattaacagcgtacttcccgcttttc
catcggatagccgagaatgatacaatacctccttctcgattgatagagctgcttacgaag
tttgtaatttcacttgttgagaagcgggggtttgatctttccctcacatgtctctatttc
cctgatctggaagtccgagacaatgctaggatatatttgaggatgctggtctgtatacca
ggacagagaattaaaaacattttgaagcccgcagatgctgtctctccatcagctcattct
tctacattctttagtgttcaaagtcctcgttttcgtcatgatcctagcaaatctcggaac
ctttcagcctatattcttcttgaacgggttacgcccctactcgtgaaacagtcatggtca
ttgtctctaccatctctaaccgttggaactggtggatatagcattatagaaaacaaaatc
gaggtagatgaagttgagccggatgacagtcaagaactccagattttgccagaagctcga
agaattgaatcaggaaaacctacgttaagggtaatggactcaaagattggagagattcta
gaaagattaagaaggtatttctcagtgattcctgattttaaacacatgcctggaattaag
gttaggataacctgtactttgagattggatgctgaaccatatagcagtgtatggggaagt
gaaactcagaatgtcgagttagagaaagttgactcacctcctgcgattttcgcgagcgtg
ctcaaattctcatcttcagctccgtatggctctatcccctcatgccgcatacctttcctt
ctcggtgagcctcattcgaacagcaatgtacccaacgaagaagtttctttagacatcgtc
ctgttagaaaacacgctgaaagaggaggagaaagattgcttgagaggaggagcacctgtg
acagtggaactggaacctaaagaacctacaccaggtttggtcgaggtttcagtggaagca
aatgcagaaaatggtcagatgattcagggaaaactcgagagtgtccctgtggggatcgaa
gacatgttcctaaaagctcttgctccacctggcgaacctgaagatacaatgccaagctac
tactctgatctattcagtgctttgtgggaagtgtgtggttcttcatccagcacggcgcac
gaaacatttgcacttaaaggagggaaaaccgctgcagcagtcagcgggactcggtcagta
aaactgcttgaagtcccagcggaaactgtaatacaggccaccgagcttcggttagcgcct
tttgtggtggctatcagcggagaccagcttgtaaacattgtaagagacggaggaattatc
gagaacattgtgtggaaggaagaagaagaagaagggaatcacgcaaatgcagagcagtct
tcatcatcctcggtgggaatccgaggccctcttcgtctgacatacattggatatggagat
gaccaagaggttccgatgacgaggagcagagggaaaatgggaaaggtaaagatgttgatg
tttctgccgccgagatatcatctgctgtttgaaatggaagttggggaaggatccacattg
gtgcatataagaacagattattggccttgcttggcttatgttgatgattatttagaagct
ttgtttctgcactag
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