KEGG   Camelina sativa (false flax): 104767821
Entry
104767821         CDS       T05044                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104767821
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csat03021]
    104767821
Enzymes [BR:csat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     104767821
Transcription machinery [BR:csat03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     104767821
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 RNA_pol_Rpb2_2 CFAP77
Other DBs
NCBI-GeneID: 104767821
NCBI-ProteinID: XP_010490096
LinkDB
Position
19:14448643..14458532
AA seq 1105 aa
MDIDDEIEAAGEINLSELGESFLQSFCKKAATSFFENYGLISHQLNSYDFFIKHGLQNVF
DSFGEMLVEPSFDISKKKADDWRYATVRFGLVTVEMPTFFSDDKELQFLPWHARLQNMTY
SARIKVNVQVEVFTKSVVKSDKFKTGQDEYVEKKILDVKKQDILIGRIPVMVKSVLCNTS
VQGKENCNKGDCAFDQGGYFVIKGAEKVFIAQEQMCIKRLWISNSPWTVSFRSETKRNRF
IVRLAENLKSEDYKRREKVLTVYFLSTEIPVWLMFFALGVSSDKEAMDLIAFDGDDARIT
NSLIASIHEADAICEGFRCGNNALAYVEQQIKSTKFPPLESVDDCLRLYLLRTMTKNMQK
HLAGDGDLKPIEHYLDASIITNGLSRAFSTGQWSHPFRKMERVSGVVANLGRANPLQTLI
DLRRTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNMSLLGLVSTQTLEPV
VEKLFDCGMEELMDDTSTPLCGKHKVLFNGDWIGLCSDSEYFVAELKSRRRRSELPREME
IKRDKDDNEVRIFTDAGRLLRPLLVVENLHKLKQDKPRQYSFEHLLDQGILELIGIEEEE
DCNTAWGIKQLLKEPNNYTHCELDLSFLLGVSCAIVPFANHDHGRRVLYQSQKHCQQAIG
FSSTNPNTRCDTLSQQLFYPQKPLFKTLASECLKKEVLFNGQNAIVAVNVHLGYNQEDSI
VMNKASLERGMFRSEQIRSYKSEVDSKDSEKRKKMDEVVQFGKTHSKIGKVDSLDDDGFP
IIGANMSTGDIVIGRCTESGADHSIKLKHTERGIVQKVVLSSNDEGKNFAAVSLRQVRSP
CLGDKFSSMHGQKGVLGYVEEQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALSKG
IASPIQKKKGSSAAYTKVTRHATPFSTPSVSEITEQLHRAGFSRWGNERVYNGRSGEMMR
SLIFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHG
ASANLHERLFTLSDSSQMHICRKCKTYANVIERTPSSGRKIRGPYCRVCESPDHVVRVYV
PYGAKLLCQELFSMGITLNFDTKLC
NT seq 3318 nt   +upstreamnt  +downstreamnt
atggacattgatgatgagatcgaagctgctggggagatcaatctttctgagctaggagaa
agttttctccagagtttctgcaaaaaagctgcaacatccttctttgaaaactatggactt
ataagtcatcagctcaactcctacgacttcttcatcaaacacgggcttcagaatgtgttt
gattcctttggtgagatgctcgttgaaccgtcttttgatatttcaaagaagaaggccgat
gattggagatacgctactgttcgattcggactagtcaccgtcgagatgcccacattcttt
tctgatgacaaggagcttcagtttctcccatggcatgccaggcttcagaatatgacttac
tcagcaaggatcaaagtaaatgtccaagttgaggtgttcacaaaaagtgttgttaaaagt
gacaaattcaagaccggacaagacgagtatgttgagaagaagatactagatgtcaaaaag
caggacattctaattggtagaatacctgtcatggtgaagtctgtcctttgcaatacaagc
gtgcaaggaaaggaaaactgcaataagggggattgtgcctttgatcagggtggatatttt
gtgataaagggtgctgagaaggtgtttatagctcaggaacagatgtgcataaagagactg
tggatttctaattcaccatggacagtctccttcaggtccgaaactaaaagaaatcgattc
attgtgcgcctcgcagagaatctgaaatcagaagactataagagaagggagaaagtactg
acagtgtacttcttgtcgactgagattccagtctggcttatgttcttcgcgctgggggtt
tcgtcagacaaagaagccatggatttaattgcttttgatggtgatgatgcaagaattacc
aacagtctcatagcttctatccatgaagctgatgcaatttgtgaaggttttcgctgtggg
aacaatgctctagcatatgttgaacagcagatcaaaagcaccaagttccctcctcttgaa
agtgtggatgactgcctccgcctgtatttgttaagaaccatgaccaagaacatgcagaaa
cacctcgcaggcgatggtgatttaaagcctattgagcattatttggatgcttccatcatc
acaaatgggcttagtagagccttctccactggacaatggtctcatcctttcaggaagatg
gaaagggtttcaggtgttgtagctaatctgggtcgtgcaaatccattgcagactctgatt
gatctgaggagaacgagacagcaagtcctatacactggcaaggttggagatgcgagatat
ccgcatccgtctcactggggcagagtatgctttttatcaactccagatggtgaaaattgt
ggtctcgtgaagaacatgtcccttcttggacttgttagcacacaaactttggagcctgtg
gtggaaaagctctttgattgtggaatggaagagctgatggatgataccagcacaccattg
tgtggcaaacataaagttcttttcaatggagactggattggattatgttcagattctgaa
tactttgtcgcggagttaaagagcaggcggcgccgaagtgaattacctcgtgagatggaa
attaaacgagataaagatgacaatgaggtgagaattttcactgacgctggtagactactc
cgacctctcttggttgtggaaaatctccacaagttgaagcaagacaaaccgagacagtat
tcttttgagcatcttcttgaccaagggattcttgagttgatcgggattgaagaagaagaa
gactgtaatacagcatggggaatcaaacagcttctgaaggaaccaaataattacacgcat
tgcgaattagacttgtcattcctgttgggtgtgagctgtgcaattgtcccatttgcaaac
cacgatcatgggagaagagttctctaccagtcccagaagcattgccaacaagccattggt
ttctcatcaacgaaccctaacacccgctgcgatacactgtcccagcagctgttctatccc
cagaagccacttttcaagacattggcgtcggagtgtcttaaaaaagaagtgctgtttaat
ggccagaacgcaattgttgctgtgaatgttcatctcgggtacaaccaagaggattccatt
gtgatgaacaaggcttcactggaacgtggtatgttccgttcagagcagattagaagctac
aaatcagaggttgatagcaaagactcggagaagaggaagaagatggatgaggttgttcag
tttggaaagacacacagcaaaatcggcaaagtagacagccttgatgatgacgggtttcct
atcattggtgctaacatgagcactggcgatattgtcattggcagatgcaccgagtctggg
gctgatcacagtataaagctcaagcacactgagagaggaattgtgcaaaaagtggtatta
tcatctaatgatgaggggaagaattttgctgcggtttctctgagacaggttcgttctcca
tgccttggagataagttttccagtatgcatgggcagaaaggtgttttaggctatgtagag
gaacaggagaattttcctttcacgatccaaggcatagttcctgatattgtgataaacccg
cacgctttcccttctaggcagacaccgggtcaactcttggaggctgcgctctccaaagga
atcgctagtcctatacaaaagaagaagggtagctctgctgcatacaccaaagtgactcgt
catgctactcctttctccactccgagtgtctctgaaatcactgagcagcttcacagggct
ggcttttcaagatggggaaacgaaagggtctacaacggtagatcgggtgagatgatgcgt
tctctgatattcatgggcccaacgttctaccagcgacttgtccacatgtcagaggacaaa
gtcaaattcaggaacaccggaccagtccaccctctcacacggcaaccagtggcagatagg
aagaggttcggcggaataaagtttggagaaatggagagagactgcctaatagctcatggt
gcttccgcgaatttgcatgagcgtctcttcactctaagtgactcctctcagatgcacatc
tgcagaaaatgcaagacctatgcgaacgtgatcgagaggactccaagcagtggaagaaag
atcagagggccttactgtagagtgtgcgaatccccagaccatgtggttagggtgtatgtg
ccttatggagctaagcttctgtgtcaggagctgttcagcatgggcatcactctcaacttc
gacaccaagctctgctag

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