Camelina sativa (false flax): 104767837
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Entry
104767837 CDS
T05044
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
csat
Camelina sativa (false flax)
Pathway
csat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104767837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104767837
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104767837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_29
Motif
Other DBs
NCBI-GeneID:
104767837
NCBI-ProteinID:
XP_010490111
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Position
19:complement(14879892..14883579)
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AA seq
764 aa
AA seq
DB search
MQRQRSILSFFQKPSSTQGLVSGNATSGGGDGGGSRFTVKEGDGKGDASVHSAVSKSVDE
VKGTDTPPEKVPRRVLPSGFKAAESVAGSGASSLFTNIMHKFVMVDDRDCSGARSREHVV
PLHDSSVCVKKDDNVFPEFRSNNGQSQERSHAFSFSGRNECDVALSALGELVNHLSRLKL
EDVLKHGDIYPYQVYRGCLRIDGQTMVNLEIFNNSCDGGPSGTLYKYLDNCVSPTGKRLL
RNWICHPLKDVVSINKRLDVVEELTANSEIIEITGQYLRKLPDLERLLGRIKSSVQSSTS
VFPALLGKKVLKQRVKAFGQIVKGLRSGIDLLLALQKESNMMILLCKLCKLPVLVGKSGL
ELFLSQFEAAIDSDFPNYQNQDMTEENAETLTVLIELFIERATQWSEVIHTISCLDVLRS
FAVTASLSAGSMARPVIFPDSNQNQEIPGPILKIQGLWHPFAVAADGQLPVPNDILLGEA
RNSSNSIHPRSLLLTGPNMGGKSTLLRATCLAVIFAQLGCYVPCETCELSLVDTIFTRLG
ASDRIMTGESTFLVECTETASVLQNATQNSLVILDELGRGTSTFDGYAIAYSVFRHLVEK
VQCRMLFATHYHPLTKEFASHPRVTSKHMACAFKSRSDQELRGGCDQDLVFLYRLTEGAC
PESYGLQVALMAGIPNQVVETASDAAQAMKRSIGENFKSSELRSEFSSLHEEWLKTLVDI
SRTSHNDNTVVEDDHDMLVCLWHELKSSYCVAQVKADNLTPLSI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtcagagatcgattttgtctttctttcaaaaaccgtcgagtactcagggtttg
gtttccggcaatgctactagtggcggcggcgacggaggaggatcgcgatttactgtgaag
gaaggggatggtaaaggtgacgcttcggtacactctgctgtatcgaaatcggtggatgag
gttaaaggaacggatactccgccggagaaggttccgcgtcgtgtcttgccgtccggattt
aaggcggcggaatccgtcgccggaagtggagcttcgtcgctgttcactaatatcatgcat
aagtttgtgatggtcgatgatcgagattgttctggagcaaggagccgagaacatgttgtt
ccgcttcatgattcgtccgtatgtgtgaagaaggatgacaatgtttttcctgaatttcgt
tccaataatggtcagtctcaagaaagaagccatgcttttagcttcagtgggagaaatgaa
tgtgatgttgcccttagtgcccttggagagttagttaatcatctgtctaggctaaagcta
gaagatgtacttaaacatggggatatttatccgtaccaagtttataggggttgtctcaga
attgatggccagacgatggtaaatcttgagatatttaacaatagctgtgatggtggtcct
tcagggaccttgtacaaatatcttgataactgtgttagcccaactggtaagcggctctta
aggaattggatctgccatccacttaaagatgtagtaagcatcaataaacggcttgatgta
gttgaggagctcacagcaaactcagaaattattgaaatcactggccagtatctccgtaaa
cttccagacttagaaagactcctcggacgcattaagtctagcgttcaatcatcaacctct
gttttccctgctcttctggggaaaaaagtgctgaaacaacgagttaaagcattcgggcaa
attgtgaaagggctcagaagtggaattgatttgttgttggctctacagaaggaatcaaat
atgatgattttgctttgtaaactctgtaaacttcctgtattagttggaaaaagtgggcta
gagctattcctttctcaattcgaagcagccatagatagcgactttccaaattatcagaac
caagatatgacagaagagaatgctgaaactctcacagtgcttattgaattatttatcgaa
agagccactcaatggtctgaggttattcacaccataagctgcctagatgtcctgagatct
tttgcagtcactgcaagtctctctgctggaagcatggcccgacctgttatttttcctgat
tcaaatcagaatcaggaaataccagggccaatacttaaaatccaaggactatggcatcca
tttgcagttgcagctgatggtcaattgcctgttccaaatgatatactccttggtgaggct
agaaacagcagcaacagcattcatcctcggtcgttgttactgacaggacctaacatgggt
ggaaaatcaactcttctgcgtgcaacatgtcttgccgttatctttgcccaacttggttgt
tatgtgccttgtgagacatgtgaactctcccttgtggatactatcttcacaaggcttggc
gcatctgatagaatcatgactggagagagtaccttcttggtagaatgcactgagacagcg
tcagttcttcagaatgcaactcagaattcactagtaatccttgacgaactgggcagagga
actagtactttcgatggatacgccattgcatactcggtttttcgtcacctggtagagaaa
gtccaatgccggatgctgtttgcaacacattaccaccctctcaccaaggaattcgcgtct
cacccacgtgtcacctcaaaacacatggcttgcgcattcaaatcaagatctgatcaagaa
ctacgtggcggctgtgaccaagacctagtgttcttgtaccgtttaaccgagggagcttgt
cctgagagctacggacttcaagtagccctcatggctggaataccaaaccaagtggttgag
acagcatcggacgctgctcaagccatgaagagatcaattggggaaaacttcaagtcaagt
gagctaaggtctgagttctcaagtctgcatgaagaatggctcaagacattggtggatatt
tctcgaacatcccacaacgacaacaccgttgtcgaagatgaccatgacatgttggtttgc
ttatggcatgagcttaaatcttcttactgtgttgcccaagtgaaggcggataacctaaca
cctctctctatctga
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