KEGG   Camelina sativa (false flax): 104768122
Entry
104768122         CDS       T05044                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
  KO
K10752  histone-binding protein RBBP4
Organism
csat  Camelina sativa (false flax)
Pathway
csat03082  ATP-dependent chromatin remodeling
csat03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104768122
   03083 Polycomb repressive complex
    104768122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csat03036]
    104768122
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     104768122
  Histone modification proteins
   HAT complexes
    HATB complex
     104768122
   HDAC complexes
    Sin3A-HDAC complex
     104768122
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     104768122
    PRC2.2
     104768122
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     104768122
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104768122
  Chromatin remodeling factors
   NuRD complex
    104768122
   NuRF complex
    104768122
   NuRF complex (fruit fly)
    104768122
SSDB
Motif
Pfam: CAF1C_H4-bd WD40_CDC20-Fz WD40 Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_EML_2 WD_LRWD1 Beta-prop_EML EIF3I ANAPC4_WD40 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd
Other DBs
NCBI-GeneID: 104768122
NCBI-ProteinID: XP_010490354
LinkDB
Position
19:complement(23071536..23072822)
AA seq 278 aa
MADEGKEETGMDQVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSPPGPYAADPYF
GVHKLILGTHTSGGAQDFLMVADVVTPAPNGEPGLRGANQDPVIPKVEIRQRIRVDGEVN
RARCMPQKPTLVGAKTSGCEMFLFDYAKHAANPQTSECDPDLRLVGHDKEGYGLSWSPFK
EGYLLSGSQDKKICLWDVSAAPQDKVLNAMFVYEGHESAIADVSWHRKNENLFGSAGEDG
RLIIWDTRTNQMQHQVKVHEKEVRTTPLYLCTYQTMLN
NT seq 837 nt   +upstreamnt  +downstreamnt
atggcggatgaaggtaaagaggagacgggaatggatcaagtggaggaagatttctctgtg
tggaagaagaacacaccatttctctacgatcttttgatctctcacccactcgaatggcca
tctctcaccgtccattgggttccatcgcctccgggtccttacgcggcggacccttacttc
ggcgtccacaagcttatactcggaactcatacttccggtggtgctcaagatttccttatg
gtcgccgacgtcgttactccggcaccaaacggtgaacctggtttgcgcggcgctaatcag
gatcctgtcattcctaaggtggagataaggcagagaatacgtgttgatggagaagtgaac
agagcgcggtgcatgcctcaaaagcctacgcttgtgggtgcaaagacaagtgggtgtgag
atgtttttgtttgattacgccaaacatgctgcaaatcctcaaacgagtgagtgtgatcct
gatctgaggttagtgggacatgacaaggaagggtatggattgtcttggagtccgtttaag
gaaggttatcttctgagtggttcacaggataagaagatctgtctttgggatgtttcagct
gcaccgcaagataaggttttgaatgcaatgtttgtgtatgagggacatgaaagtgctatt
gcagatgtatcatggcacaggaagaatgagaacctttttgggtctgcgggtgaggatggt
cgattgataatatgggacacacggacaaaccaaatgcaacaccaagtgaaagttcatgaa
aaggaggtaagaaccactcccctatatctctgcacatatcaaacaatgttaaattag

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