Camelina sativa (false flax): 104768209
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Entry
104768209 CDS
T05044
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104768209
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104768209
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
104768209
NCBI-ProteinID:
XP_010490435
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Position
3:complement(4177800..4181521)
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AA seq
633 aa
AA seq
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MSSVKLQLHDKGNHVVMDNGIARVTLSKPDGIVTGIEYNGIDNLLEVLNEEVNRGYWDLV
WGGSGTAGGFDVIKGTNFEVIMKNEEQVELSFTRKWDPSLEGKAVPLNIDKRFVMLSGSS
GFYTYAIYEHLKEWPAFSLAETRIAFKLRKEKFHYMAVTEDRQRFMPLPDDRLPDRGQAL
AYPEAVLLVNPIEPQFKGEVDDKYQYSCENKDITVHGWICTEQPSVGFWLITPSHEYRTG
GPQKQNLTSHVGPTALAVFMSAHYTGEDLVPKFSEGEAWKKVFGPVFVYLNSSTDDDNDP
LWLWKDAKSQMNVETESWPYSFPASDDYLKAEQRGNVVGRLLVQDRYVDKDFIAATRGYV
GLAVPGAAGSWQRECKDYQFWTRTDEEGFLYISGIRPGQYNLYAWVPGFIGDYKYDDIIT
ITQGCYIYVEDLVYQPPRNGETLWEIGFPDRSAAEFYVPDPNPKYINKLYKNHPDRFRQY
GLWERYAELYPDKDLVYVVGSSDYRKDWFYAQVTRKKDNKTYQGTTWQIKFELKNIDQSH
SYTLRVAIASATFSELQIRVNDANTIPLFTSGLIGRDNSIARHGIHGLYWLFNVEVAVAK
LVEGENTLFLTQPRSTSPFQGIMYDYIRFEAPS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgttaagctgcagttgcatgataagggcaatcatgtggtgatggataatggc
attgcacgggttacattatcaaagcctgatggtatcgttaccggaatcgaatataatggc
atcgataacttgctcgaggttcttaatgaagaagtcaacagaggatattgggatctcgta
tggggaggatcaggaacagctggtggatttgatgtaatcaaaggaacaaactttgaggta
ataatgaagaacgaagaacaagttgagctttctttcacaagaaaatgggatccatcacta
gaaggcaaagcagtccctctgaacattgacaaaagatttgttatgctaagcgggtcatca
ggattctacacttacgccatctacgagcatctaaaagaatggcctgctttttcacttgcc
gaaacacgaattgccttcaagctcagaaaagagaagtttcactacatggcagtaacggaa
gataggcagagattcatgccattgcctgatgatcgattacctgacagaggccaagctctg
gcttaccctgaagctgttctacttgttaatcctatagagcctcaattcaaaggagaggtt
gacgataagtaccaatattcatgtgagaacaaagacattactgtccatggatggatatgc
acagagcagccgtcggttggtttctggctcataactcctagccatgagtatcgaaccggt
ggacctcaaaaacagaacttgacatctcacgttggacctactgctcttgctgtatttatg
agtgcacactacacaggggaagatctagtgccaaagtttagtgaaggagaggcatggaag
aaggtctttggacctgttttcgtctatttaaactcgtctactgatgatgataatgaccct
ctttggctctggaaagatgctaaatctcagatgaatgtggaaactgaaagctggccttac
agttttccagcttcagatgactatttgaaagcagagcaacgtggtaatgttgttggcaga
cttctcgttcaagacaggtacgtagataaagatttcattgcagccactagaggttatgtt
ggtttggctgtgcctggagctgctggttcatggcaaagagaatgcaaggattatcaattt
tggacaagaacagatgaagaaggattcctttacataagtggaatacggccaggacaatac
aatctctatgcatgggttcctggttttattggtgactataaatacgatgatattatcacc
atcacccaaggttgttatatatatgtggaagatcttgtatatcaacctccaagaaatgga
gaaacgttatgggagattggttttccagatcgatccgcagcagagttttatgttcctgat
ccgaatccaaaatatatcaacaaactctataaaaatcaccctgacagattccgtcaatat
ggattatgggaaagatacgccgaactatatccggataaagacttggtatatgtagttggc
tctagcgactatagaaaagactggttttacgctcaagttactagaaaaaaggataacaaa
acatatcaaggaacaacatggcaaatcaaattcgaactcaaaaacattgatcagagtcac
tcctatactttacgagtagccattgcatccgctactttttccgaactccaaatacgtgtg
aacgatgcaaatacaatcccgttgttcacaagcggactgatcgggagagacaactcgata
gcaagacatggaatacatggattgtactggttgttcaatgtggaagtggctgtcgctaag
cttgtagaaggcgagaatacattgtttctcacacagccaaggtccacaagtcctttccaa
gggatcatgtatgattacatccgatttgaagctcccagctaa
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