Camelina sativa (false flax): 104768227
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Entry
104768227 CDS
T05044
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104768227
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104768227
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
OGFr_N
Motif
Other DBs
NCBI-GeneID:
104768227
NCBI-ProteinID:
XP_010490456
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Position
3:complement(4184137..4188675)
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AA seq
673 aa
AA seq
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MKKRLADRLLHRFTNHETASNAGHHWLTDQGTSGPIHRKDHRMPSQGVKLHIHDRYVVMD
NGILQVTLSNPGGIITGIKYNGVDNVLEVRNKETNRGYWDLHWNEPGGKGIFDVISGVSF
RVIVETEEQVEISFLRTWDPSLEGKYIPLNIDKRFIMLRGSSGVYSYAIYEHLKDWPGFE
LGETRIAFKLRKDKFHYMAVADDRKRIMPFPDDLCKGRCQTLDYQEASLLTAPCDPRLQG
EVDDKYQYSCENQDLRVHGWISFDPPVGFWQITPSNEFRSGGPLKQNLTSHVGPTTLAVF
HSTHYAGKTMMPRFEYGEPWKKVYGPVFIYLNSTANGDDPLCLWDDAKIKMMAEVESWPY
SFVASEEYPKSEERGTALGRLLIRDRFISNDLISAAGAYVGLAPPGGSGSWQIECKGYQF
WAVGDEAGYFSIGNVRPGEYNLYAWVPGFIGDYHNGTIVSVTSGCKIEMGDIVYEPPRDG
PTLWDIGIPDRKASEFFIPDPDPTLVNRALVHHQDRFRQYGLWKRYTDLYPNDDLVYTVG
VSDYRRDWFFAQVPRKKGDVHEGTTWQIRFKLENIDQKANYKLRIAIASATLAELQIRVN
DAEAVRPLFTTGLIGRDNSIARHGIHGVYMLYEVNIPGNRLVQGDNTIFLRQPRCNGPFQ
GIMYDYIRLEGPP
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagagactggctgatcggctcctgcatcgttttactaaccatgaaaccgcttca
aacgccggccaccactggttgacagatcaaggtacaagtggccctattcatagaaaggat
cacaggatgccctctcaaggtgtcaagctgcatatccatgacagatatgttgtgatggac
aatggaattctccaagttacactatcaaacccaggtggaatcatcaccggcatcaagtat
aacggcgttgacaatgtgctcgaagttcgtaataaggagactaacagagggtactgggac
ctgcactggaatgaacctggaggcaagggaatatttgatgtcatcagtggtgtgagtttc
agggtcatagtcgagactgaagaacaggttgagatctcatttctaagaacatgggatcca
tcccttgagggaaagtacattcccctgaatatcgataaaaggtttataatgcttcgtggt
tcttctggagtttactcatacgccatttatgaacacctcaaggattggcctgggtttgaa
cttggagaaacaagaatcgcgttcaagctcagaaaagacaaattccattacatggctgtg
gcagatgaccgaaagaggataatgccttttccagatgatctatgcaaaggaagatgtcaa
actctagattaccaggaagcttctctgctcactgctccatgtgatccacgcttgcaaggc
gaagtagatgacaaataccaatactcgtgtgagaatcaggatctcagagtacatggatgg
atatccttcgatccacctgtaggattctggcaaattacgcccagtaatgagtttcgctca
ggcggaccactcaaacaaaacctcacgtcacatgttggcccaaccactcttgcagtgttt
cacagtacccattatgccggaaaaaccatgatgcctcgctttgaatacggtgagccttgg
aaaaaagtatatggccctgttttcatttacctaaattccacagccaatggagatgatcca
ctttgcttatgggacgatgctaagataaagatgatggctgaggttgaaagttggccttat
agcttcgtggcatctgaggaatatccaaagtctgaagaacgtggcacggcccttggtaga
ttacttatccgtgacaggttcataagcaatgatctgatttcagcagcaggtgcttatgtg
ggtttggctccacctggtggttctggttcttggcaaattgaatgcaagggataccaattt
tgggcggtaggagatgaggctggctatttctcaatagggaacgtgcgtcctggcgagtat
aatctctatgcctgggtccccggtttcattggagattaccataacggcacaattgtttct
gtgacttcagggtgcaagattgaaatgggtgatatcgtttatgaacctccgagagatgga
cctaccttatgggatattggtatccctgaccgaaaagcttctgagttctttatcccagat
cctgatcccacgcttgtaaacagggctttagtccatcatcaagacaggttcaggcaatat
gggttgtggaagagatacacagatttgtatccaaatgatgaccttgtttacactgttggt
gtaagcgattatcgcagagactggttctttgctcaggttcccaggaagaaaggagacgtg
catgaaggaacaacttggcagattaggtttaaacttgaaaacatcgatcaaaaggcgaat
tacaaactgagaatcgccatagcatctgcaaccttagccgagttgcagattcgagtcaat
gatgcggaagcagtccgccctctcttcacaaccggactcattgggagagacaattcaata
gcaaggcatgggatccatggggtttacatgctgtatgaggtgaacataccaggaaaccgg
cttgtccaaggtgataacactatattcctgagacagccaagatgcaatggtcccttccaa
gggattatgtacgactacattcgtcttgaaggccctccataa
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