Camelina sativa (false flax): 104768412
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Entry
104768412 CDS
T05044
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37e isoform X3
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
csat04141
Protein processing in endoplasmic reticulum
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104768412
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104768412
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104768412
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104768412
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104768412
03009 Ribosome biogenesis [BR:
csat03009
]
104768412
03110 Chaperones and folding catalysts [BR:
csat03110
]
104768412
04131 Membrane trafficking [BR:
csat04131
]
104768412
03051 Proteasome [BR:
csat03051
]
104768412
03029 Mitochondrial biogenesis [BR:
csat03029
]
104768412
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104768412
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
104768412
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19 complex
104768412
Complex C
Prp19-CDC5 complex
104768412
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104768412
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP70 / DNAK
104768412
Membrane trafficking [BR:
csat04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
104768412
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
104768412
Proteasome [BR:
csat03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
104768412
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
104768412
Exosome [BR:
csat04147
]
Exosomal proteins
Proteins found in most exosomes
104768412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
104768412
NCBI-ProteinID:
XP_010490701
LinkDB
All DBs
Position
20:complement(741112..744344)
Genome browser
AA seq
651 aa
AA seq
DB search
MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
QVAMNPVNTVFDAKRLIGRRFSDSSVQSDMKLWPFKIQAGPADKPMIYVNYKGEEKEFAA
EEISSMVLIKMREIAEAYLGVSIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKSKKDITGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQGAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKK
KVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEFED
KMKELESICNPIIAKMYQGAGGEAGGPGAAGMDDDAPPASGGAGPKIEEVD
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtaaaggtgaaggtccagcaatcggtatcgatctcggtactacttactcttgc
gtcggagtatggcaacacgaccgtgttgagatcattgctaatgatcaaggaaacagaacc
actccatcttacgttgctttcaccgactccgagaggttgatcggtgatgccgctaagaac
caggtcgccatgaaccctgttaacaccgtctttgatgccaagagattgatcggtcgtcgt
ttcagtgacagctctgtccagagtgacatgaaattgtggccattcaagatccaggccgga
cccgccgacaagccaatgatctacgtcaactacaagggtgaagagaaggagttcgctgct
gaggagatctcttccatggttctcattaagatgcgtgagattgctgaggcttaccttggt
gtctctatcaagaacgctgttgtcactgttcctgcctacttcaacgactctcagcgtcaa
gccacaaaggatgctggagttattgccggtttgaacgttatgagaatcatcaacgagccc
acagctgcagctattgcttacggtcttgacaagaaggctaccagtgttggagagaagaac
gttcttatcttcgatcttggtggtggtacttttgatgtctcccttcttaccattgaggaa
ggtatctttgaggtcaaggctactgctggtgacactcatcttggtggtgaagattttgac
aacagaatggtgaaccatttcgttcaggagtttaagaggaagagcaagaaggatatcact
ggtaacccaagagctcttaggaggttgagaacttcatgtgagagagcgaagaggactctt
tcctccactgctcagaccaccatcgagattgactctctctacgagggtattgacttctac
tccaccatcacccgtgctagatttgaggagctcaacatggatctattcaggaagtgtatg
gagccagttgagaagtgtctacgtgatgctaagatggacaagagcactgttcacgatgtt
gtccttgttggtggttccacccgtatccctaaggttcagcaattgcttcaggacttcttc
aacggcaaggagctttgcaagtctatcaaccccgatgaggctgttgcctacggtgctgcc
gtccagggagctattctcagcggtgaaggaaacgagaaggtccaagatcttctgttgctc
gatgtcactcctctctcccttggtttggaaactgccggaggtgtcatgaccactttgatc
cccagaaacacaaccatcccaaccaagaaggagcaggtcttctccacctactctgacaac
cagcccggtgtgttgatccaggtgtacgaaggtgagagagccagaaccaaggacaacaac
cttctcggaaagtttgagctctccggaatccctcctgctccacgtggtgtccctcagatc
actgtctgctttgacattgacgccaatggtatcctcaacgtttctgctgaggacaagacc
accggacagaagaacaagatcaccatcaccaatgacaagggtcgtctctcaaaggatgag
attgagaagatggttcaagaggcagagaagtacaagtctgaggacgaggaacacaagaag
aaggtcgaggccaagaatgctcttgagaactacgcttacaacatgaggaacaccatccag
gatgagaagatcggtgagaagctacccgcagcagacaagaagaagatcgaggactcaatt
gagcaggcgattcagtggctcgagggtaaccagttggccgaggctgatgagtttgaagac
aagatgaaggagttggagagcatctgcaacccaatcatcgccaagatgtaccaaggagct
ggtggtgaagccggtggaccaggtgccgctggaatggacgatgatgctcctcctgcttca
ggcggtgctggccctaagatcgaggaggtcgactaa
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