Camelina sativa (false flax): 104768689
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Entry
104768689 CDS
T05044
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
csat
Camelina sativa (false flax)
Pathway
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104768689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104768689
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104768689
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
104768689
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104768689
Exosomal proteins of colorectal cancer cells
104768689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
Flagellin_N
ATG1-like_MIT1
Motif
Other DBs
NCBI-GeneID:
104768689
NCBI-ProteinID:
XP_010491021
UniProt:
A0ABM0XU04
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Position
20:complement(1969669..1972246)
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AA seq
440 aa
AA seq
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MASGSSIGVGGVFVNAEVTTSGRPVLRLNEVECFLLSSVDFDSEDDPPRFTALKSGNLIL
TTHRLIWIPSQSNVAVPSSIPLAAVTHIFSHKKSIKSMFHSPRIRFQTDPGSIVVTIVFR
GKGDFDGFLTKFWECWRGRAWEEEDKSESETSRSGGSGTVAQGLYGNDGTVRMVGLAGIL
RKEQEQWESTDKSLQDAFQDLNALMSKAKEMVSLAEKMRQKLLSAPSSQNSSTDDEEMGS
KEEMQQWMLSVGIISPVTKESAGALYHQELSRQLADFVRIPLEQAGGMISLTDMYYHFNR
ARGTELISPDDLWKACTLWEKFDVPVMLRKFDSGVMVIQNKSHSDEEVMSRIRMLVTKTE
TLRAGVTASDAALTLKIAPAMAKEHLLTAETKGLLCRDMSPDGLRFYFNLFPEIDLTNLH
IVKDFGTYGEWVKATSILSV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggctagtggaagcagcatcggagtcggtggtgtgtttgtgaacgcagaggttaccacg
agtggtagaccagtgcttcgactcaatgaagtcgagtgtttcctcctctcctccgtcgat
ttcgattccgaagatgatccgccgcgattcaccgctttaaaatccggtaaccttatctta
accactcatcgtctcatatggattccatctcaatcaaacgtagctgttccttcttcgatt
cctctcgccgccgttactcacatcttctctcataagaaatcgataaagtctatgttccat
tcgccgagaatccggtttcaaacggatccgggttcgattgtggtgactattgtctttagg
gggaaaggtgatttcgatggctttttgacgaaattttgggaatgttggagaggcagggcg
tgggaagaggaggataagagcgagagtgagacttctcgttcaggaggatctggaacggtt
gctcaaggtttatatggaaacgatggaacagtgaggatggttggattggctgggattttg
aggaaagagcaagaacagtgggagagcactgataaaagcttgcaagatgcttttcaggat
ttgaatgctcttatgagtaaggctaaagagatggtgagtctggcagaaaaaatgcgtcaa
aagctcttatctgcgcctagtagtcagaacagttcaactgatgatgaagaaatgggttcc
aaagaagagatgcaacagtggatgttgagcgttggtattatctctccagttacaaaggaa
tctgctggcgccttgtaccatcaagaattgtcccgccagctggcagattttgtcagaatc
ccattagaacaagctgggggaatgatcagccttactgatatgtattaccacttcaatcgt
gctcgtgggacagagttgatctctccagacgatttgtggaaagcttgtaccctctgggag
aaatttgatgttccagtaatgctgcggaagtttgatagcggtgtgatggtgatccaaaac
aagtcccatagtgatgaggaggttatgagtagaatcagaatgcttgtgaccaaaactgaa
actttgagagccggagtcactgctagtgatgcagctttgacactgaagatcgccccagcc
atggctaaggaacatctacttactgcagagaccaaaggtttgctgtgtagagacatgagc
ccagacgggcttcgattctatttcaacctgtttccagagatcgatctcaccaatctacat
atagtcaaggactttgggacgtatggtgaatgggttaaagcgaccagtatcttgtcagta
tga
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