Camelina sativa (false flax): 104768717
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Entry
104768717 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104768717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104768717
03036 Chromosome and associated proteins [BR:
csat03036
]
104768717
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104768717
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104768717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
104768717
NCBI-ProteinID:
XP_010491057
LinkDB
All DBs
Position
3:complement(4453724..4459675)
Genome browser
AA seq
1041 aa
AA seq
DB search
MFGSSNPFGQSSGSSPFASQSLFGQTSNSSSNNPFAPATQFGTSTPFAAQTGSSIFGSTS
TGVFGAPQASSPFASTPTFGASSSPAFGNSTPAFGASPASSPFGGSSGFGQKPLGFSTPQ
SNPFGSTMQQSQPAFGNSTFGSSTPFGATNTPAFGASSTPSFGVTSTPSFGASSTPAFGA
TSTPAFGASNSPSFGVTNTPAFGASPTPAFGSTGTTFGNTGFGSGGAFGASSTPAFGASS
TPAFGASGTPAFGASSTPAFGASSTPAFGASSTPAFGASSTPSFGASNTSSFSFGSSPAF
GQSTSAFGSSAFGSTPSPFGGQGAQASTPNFGGSGFGQSPFGGQQGGSRAVPYAPTVEAE
AGSGTQPAGKLESISAMPAYKDKNHEELRWEDYQRGDKGGPLPAGQSPGNAGFGISTAQA
NPFSPSPAFGQTSANPTNPFSSSTSTNPFAPQTPTIASSGFGTATSNFGSSPFGVTSSSN
LFGSTSSATTSVFGSSSAFGTTTSSPLFGSSSNPGFGSSPSIFGSAPGQAATSAFGNSQP
STLFSSTPSAGQTGSAFGQTGSAFGNFGQSSAPAFGQNSLFNKPSTGFGNMFSSSSTLTT
PSSSPFGQTMTAGMTPFQSAQPGQASNGFGFNTFNQTQAAKTAGNAGGLGFFGQGNFGQS
PAPLNSVVLQPVAVTNPFGTLPAMPQISINQGGNSPSIQYGISSMPVVDKPAPVRISSLL
TSRHLLHRRVRLPARKYRPGENGPKVPFFTDDEESSSTPKADALFIPRENPRALVIRPVQ
QWSSRDKSTLPKARPTAPVHENGRGPDMATDAINHEKNGNGELGATEERQHPSVNANQKQ
NGTTCSDPTSEKDRPYKTLNGHRAGEAAIVYEHGAEIEALMPKLRHSDYFTEPRIQELAA
KERANPGYCRRVRDFVVGRHGFGSIKFMGETDVRRLDLESLVQFNNREVIVYMDESKKPA
VGQGLNKPAEVTLLNIKCVDKKTGKQFTEGERVEKYKMMLKKKAEAQGAEFVSFDPVKGE
WKFRVEHFSSYKLGEEDDSEV
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctcatctaatccttttggacagtcatctggtagcagcccatttgcgtcccaa
tctttatttggtcagaccagcaattcaagtagtaataatccctttgctccagcaacacag
tttggtacgtctactccttttgctgcacagacgggaagttcaatatttggaagcacttca
accggtgtttttggtgcacctcaagcatcctctcccttcgcctccaccccaacttttgga
gcttcttcatcaccagcatttgggaattctactccggcctttggagcatctccagcatct
tcaccttttggtgggtcttctggttttgggcagaaacctttgggattttcaacgccccag
tcaaatccttttggaagcacgatgcagcaatcccaacctgcatttggaaacagtactttt
ggttcatctacaccttttggtgccacaaacacacctgcctttggcgcatcaagcacgcct
tccttcggtgtcactagcacaccctcgtttggtgcatcgagcacgcctgcctttggtgcc
acaagcacgcctgcctttggcgcctcaaactctccctcctttggcgtcacaaacacacct
gcatttggcgcgtcaccgactccagcttttggtagcactggcaccacgtttggcaacact
ggctttggttctggaggtgcttttggagcatcaagcacccctgcttttggagcttcaagc
acccctgcttttggtgcatcaggcactcctgcatttggtgcatcaagtacacctgccttt
ggggcatctagtacacctgcctttggggcatccagtacacctgcctttggggcatccagt
acaccttcttttggggcatcaaatacctcatcctttagttttggctcctcgccagccttt
ggccagtctacatccgcgtttggtagcagcgcttttggctctacaccatctccttttgga
ggtcaaggtgcgcaggcttcaaccccaaattttgggggttctggttttggtcaatcacct
ttcggtggtcaacaagggggtagtcgagccgtgccttatgcaccgacagttgaggcagag
gcagggagcggtacgcagcctgctggaaagttggaatctatttctgccatgccagcatac
aaagataaaaaccatgaggagcttaggtgggaagattaccaacgaggagataaaggtgga
ccacttcctgctggccagtctcctggaaatgccggatttggtatatcaactgctcaggca
aatcctttttctccatcaccggcatttggtcagacatcagcaaatccaacaaaccctttt
tcgagctcaacatctacaaacccttttgcccctcaaaccccaacaattgccagttcgggt
tttggaacggctacctcaaattttggttcctcgcccttcggtgtaacatcttcttccaat
ctttttgggtcaacttcgtcagctaccacatccgtttttggatcatcgtccgcttttgga
acaacaacatcatcaccgttatttggttcatcaagcaatccgggatttggctcttctccg
tcaatctttggttcggctcctggtcaggcggcaacttcggcgtttggaaacagtcagcca
tctactctattcagttcaaccccctcggccgggcagactggttctgcgtttggacagact
ggttctgcttttggaaacttcggacagagtagtgctcctgcatttggtcaaaatagtctt
ttcaataaaccctccactggatttggaaacatgttttcaagttcttctacattaactacg
cctagcagctctccatttggacaaacaatgactgctggtatgacaccctttcaatcagct
cagccaggtcaagcatcaaacggttttggtttcaacaccttcaatcaaacgcaagcagct
aaaacagctggaaatgctggtggactgggattttttggtcaaggcaacttcgggcaatcg
cctgctccgctgaactctgttgttttgcaaccagttgctgttacaaatccatttggaaca
cttcctgctatgcctcaaatttcaataaatcaaggtggaaattcaccttccattcaatat
ggaatctccagcatgcctgttgttgacaaaccagctcctgttagaatatcatctctcctg
acttctcgacaccttttacacaggcgggtcaggttgccggcaagaaagtaccgtcctggc
gagaatggtccaaaggttccatttttcactgatgacgaggaaagctcaagtacaccaaag
gcagatgctcttttcattccaagggagaaccctagagctctagttatacgcccagttcaa
cagtggtcttcaagggacaaatcaacacttccaaaggctcgcccgacggctccagtacat
gaaaatgggaggggtccagacatggctactgatgcaataaaccatgagaaaaatggtaac
ggagaacttggtgcaactgaagaaagacagcatccatcagttaatgcaaatcagaaacag
aatggcacaacatgctcagatccgaccagcgagaaagaccgtccctacaaaactctaaat
ggacacagagcaggagaagctgcgattgtttatgagcatggtgcggaaatcgaggctcta
atgccgaagctacgccattctgattatttcaccgagccacgtattcaggaactcgcagct
aaggaaagagcaaatccaggttattgcaggcgggttagagactttgtggttggaaggcac
ggttttggtagcataaagttcatgggagagacagatgttcgcaggctagacttggaatcg
ctggttcagttcaataacagggaagtgattgtatacatggacgagagcaagaaaccggca
gttgggcaaggtctgaataaaccggctgaggtaaccttgctgaacataaaatgtgttgat
aagaagacaggaaagcagtttactgaaggagagagagtggagaagtataagatgatgctt
aagaagaaagctgaggcacaaggagctgagtttgtgtcgtttgatcctgtgaaaggcgag
tggaagtttcgggtcgagcattttagttcctataagctgggcgaggaagacgacagtgaa
gtataa
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integrated database retrieval system
