Camelina sativa (false flax): 104768740
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Entry
104768740 CDS
T05044
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104768740
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104768740
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Helicases
104768740
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
104768740
NCBI-ProteinID:
XP_010491077
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All DBs
Position
20:2162749..2166168
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AA seq
618 aa
AA seq
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MFGLYNKRSPTPKAGSERQETAAAVMDSSANTNKALTETRFSDLEPPLSGDIIEALSQSN
FEFCTPVQAATIPLLCRYKDVAVDAATGSGKTLAFVLPLVEILRKSTSYPPKPHQVMGVI
ISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVRADVKIIEEEGCNLLIGTPGRLSD
IMERLEILDFRNLEILILDEADRLLEMGFQKQVNYIISRLPKQRRTGLFSATQTEGVEEL
AKAGLRNPVRVEVRAESKSESSQQLTNSRTPSGLHLEYMECEADKKSSQLVDLLIKNSNK
KLMVFFMTCASVDYWGFVLSKIPTLKSISLIPIHGDMKQNARDKALASFTKASSGALLCT
DVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAIVFLLPREEAYVEFMRI
RRVPLEERKCSEDASDVIPIIRSAAMKDRAVLEKGLKAFVSFVRAYKEHHCSFIFRWKEL
EIGKLAMGYGLLYLPSMSEIKQHRLSSEGFTPVEGVKFEDIRFTDKSREKQRQQNVKARK
EKRQEEKKEKGKRKRVDGTATNDPKKASRKLTGKQRQTIQTAEDEEEMDRDYRSLIKLKK
GLIKEDEYARLTGEDDLF
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcttatataacaaaaggtcaccgacccctaaagcgggaagtgagagacaagaa
acagcggcggccgtcatggattcgtcggcgaacacaaacaaagctttaacggagacgcgt
ttttccgacctagaacctccactctccggagatatcattgaggcgcttagtcaatctaat
ttcgagttctgcactccggttcaagccgccacgattcctttactctgccgttacaaggat
gtcgccgtcgacgctgccactggttctggaaaaaccctagctttcgtcctcccactcgtt
gaaatcctccgtaaatccacctcataccctccgaagcctcaccaggtcatgggggttatt
atatcgccaacgagagagctatcaacgcagatatataatgtggcacagccatttgtttcc
actttggcaaatgtgaactctgtgttacttgttggaggccgagaggtgagagctgacgtt
aagattattgaagaagaaggatgcaatctcttgattggtacacctggaaggctttcagat
ataatggaacgactggagattcttgattttcgaaatcttgagattcttattttggatgag
gcagatagacttttggagatggggttccagaagcaggtgaattacattatctcacgcttg
ccaaagcagaggaggactggcctcttttcagctacacaaacagagggtgttgaagagctc
gccaaggctgggcttaggaaccctgtgagagttgaagttcgagctgagtcgaagtcggaa
tcatcccagcaattgacaaactcgagaaccccttctggtcttcatcttgagtatatggaa
tgcgaagcagataagaaatcatcacaactagtggatctgctcatcaagaacagtaataaa
aagcttatggtattcttcatgacttgtgcttctgttgattactggggattcgtactttca
aaaattcctaccctgaagtccatatctttaattccaatccatggagatatgaagcaaaat
gcaagagacaaggcattagcttcatttactaaagcatcaagcggtgctcttctgtgcaca
gatgttgctgcacgtgggcttgatataccaggcattgattacgtagttcagtatgatccc
ccacaagacccaaatatgttcaaccatagggccggaagaactgcaagattggggagacaa
gggagggctattgtgtttttacttcccagggaggaagcctatgtagagtttatgcgcata
agaagagtccctctggaagagaggaaatgctctgaggacgcatccgatgtcatcccgatt
atacgttcggctgccatgaaggaccgggcagtgttggagaagggattaaaggcatttgtt
tcctttgtccgtgcttataaggaacatcactgctctttcatcttcagatggaaagaactt
gagatcggaaagttagccatgggatatggcctcttgtatcttccttccatgtctgaaatt
aaacaacacagactttctagtgagggtttcacacccgttgaaggcgtcaagtttgaagac
ataagattcacggacaaatctcgggagaaacaaaggcagcaaaacgtaaaagcaaggaaa
gagaaacggcaagaagagaaaaaagagaaaggcaagagaaaaagggttgatggtactgct
actaatgatcctaagaaagcgtcgaggaagctaacggggaagcaaagacaaactattcaa
actgctgaagatgaagaagagatggatcgagattaccggtcactgataaaactaaagaaa
gggttaattaaagaagatgaatatgcaagacttacaggagaggatgatttattctga
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