Camelina sativa (false flax): 104768753
Help
Entry
104768753 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104768753
KO
K08518
syntaxin-binding protein 5
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104768753
Membrane trafficking [BR:
csat04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104768753
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
104768753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Synaptobrevin
WD40_Prp19
WD40
Beta-prop_HPS5
WDR55
Beta-prop_RIG_2nd
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
104768753
NCBI-ProteinID:
XP_010491088
LinkDB
All DBs
Position
20:2227561..2234430
Genome browser
AA seq
1096 aa
AA seq
DB search
MFVRKFLQKSSGGQNPPHPPPRGCLIAEDLDPHIVTHCGIPSTASLLAFDPIQCLLAVGT
LDGRIKVIGGDNIEAILASPKQLPFKNLEFMQNQGFLVSISNENEIQVWDLDLRQPASSL
QWESNITAFAILHGTGYMYVGDEYGMVSVLNYNADEGKLLQLPYYVPTDALAEAAGLSSP
IDYPVVGILSQPCSWGTRLLIAFSNGLLFLWDASEDRVVLVRGNKDLPVEGKTVGDSLEA
SHDEFSDLELDGKEISSLCWASTDGSVLAVGYVDGDILFWDFSDGQKGNPSNHVVKLQLS
SAEKRLPVIVMHWCLDVSRKSSGGKLFIYGGDIIGSDEVLTMLGLDWSSGMGSLKCVGRA
DLTLSGSFADMVLSPIACSRQSGMFLFLLTNPGQLQAYDDTSLASLMSQQEKKISVPPLP
YPMTVPTMDPHMTVATFSALNVNDKTSLALSEIVLAEKARTPRTPSGENAQWPLTGGVPS
HLDDYKLERLYMAGYQDGSVRIWDATYPCLSLMYVLEPKANVIDITGANASVTAFGFCSK
TSWLAVGNECGMVRLFNLVGHKSGGTLEVVSNTDKKAHHLHQEDGPQWLAAFSFLDSPVC
SLEFLQFTTRLAVGFKCGKVAMLDTGVPSVMFVTNSLSDSGSPIKSLYVKSSSAPTGSKS
DPTNQNSINSEEDLILCAMTKDGQTILLDGNTGKIVASCLIPQKNPTAICMHIIEDCYEN
SETPSAKPAGKISGKEKNGNKSHIVDASESHSPVGEQNPVTETKFVDQRFANSLFLICYE
DALRLYSLKSLSQGSLESNMEVSLPRPCCWMGILKKDGRECAVLLLYRTGHIEIRSFPKL
EVVGESSLLSLLRWNFKPNMEKTVCSDDFGHVVLVNGCEVAILSFLANTNGFRLPESLPL
LHDKVLAAAADATFSHISAHKKNHDGTPKFLSNIIKGFRSSSEQKVDQVQDFSHLGNIFF
NPPYLKPSDTGGDDEKIVELNIDDIEIDEPVIVLPLTEKDKKEKKDKRTDKEKLFDGASS
NAQPKTRTVDEIKSKYRKAGETSAIASQAKDKLLERGEKLERISQRTAELQDGAENFASM
AHELAKQMEKRKWWNI
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtcagaaaatttctgcagaaatcctccggcggtcagaatcctcctcatcctcct
cctcggggatgtttgatagcagaagacctggatcctcatattgtcacccactgtgggata
ccttcgacggcatctcttcttgcctttgaccctattcaatgcctcttggctgtgggtaca
ctagatggaaggataaaagtgattggtggcgataacatcgaggcgattcttgcatctcct
aagcagttacctttcaaaaacttagagttcatgcagaaccaaggctttcttgtcagcatc
tcaaacgaaaacgagattcaggtgtgggacttggatcttaggcaaccagcatcaagctta
cagtgggagtcaaacattactgcgtttgcaatccttcatggcactggctatatgtatgtt
ggtgatgagtacggtatggtgtctgttctaaactacaatgctgacgaagggaaattactg
cagcttccttattatgttccaactgatgctttagctgaagcagcggggctgtcatctcct
attgattatccggttgttggaattctttctcagccttgttcatggggaactagattgttg
attgcattttcaaatggattgctttttctttgggatgcatcagaagatcgtgttgtgtta
gtacgaggaaacaaagatctacctgtggagggtaaaacagtcggtgattctctggaagcc
tcacatgatgagttttctgatcttgaacttgatggaaaagagataagttctttgtgttgg
gcatcaactgatggttcagttctcgctgttggctatgtggatggggatatattattttgg
gacttttctgatgggcaaaaggggaacccatctaatcacgttgttaagttacagttgtct
tcggctgagaaaagacttcctgtcattgttatgcattggtgtttggatgtatctcgcaag
agtagtggtggaaaactcttcatctatggtggtgatatcattggatctgacgaagtactt
acgatgttaggtcttgattggtcttctggtatgggaagtctgaaatgtgttggccgtgct
gacctgaccctaagcggttcatttgctgatatggtcttatctccaattgcctgttcaagg
caaagtgggatgtttttatttctattgacaaatccaggacaattgcaagcatatgatgat
acctctctggcttctctgatgtctcagcaagagaagaagatttccgttcctccgctgcca
tatcctatgactgtaccaacgatggatccacatatgacagtggcaacattttctgcatta
aatgtgaatgataaaacgtcactagccctttctgagatagtcttagctgaaaaagctcga
acaccacgtactccatccggtgaaaatgcacaatggcctctgacaggtggtgttccaagc
caccttgatgattacaagcttgaaagactgtacatggcaggttatcaagatgggtctgtg
cgaatatgggatgcaacctatccatgcctgtctcttatgtatgtactggagccaaaggca
aatgttattgacataactggagcaaatgcatccgtaacggcttttggcttctgctctaag
acttcttggttggctgttggtaacgaatgtggtatggttcgcctattcaacctggtcggc
cataaaagtggaggaactttggaagttgtttccaacactgacaagaaagctcaccatttg
catcaagaagatggtcctcaatggttggctgcattttccttcctggattccccagtgtgc
tccctggaattcctacagtttacaacaaggcttgccgtgggatttaaatgtggcaaggtt
gcaatgctcgatactggtgtcccgtcagtaatgttcgttacaaatagcttatctgactca
ggttccccgatcaagtcactctatgtgaaatcctcttcagctcccactggctcaaaaagt
gatccaactaatcagaattccataaattctgaagaagatttaatcttgtgcgcaatgacc
aaggatggacagaccattcttttggatggcaatactgggaaaatagtcgcctcatgcttg
atacctcagaagaacccaactgcgatttgtatgcacattatagaggattgctatgagaac
tctgaaacgcccagtgcaaaaccagctggaaaaatctctgggaaggagaaaaatggaaac
aaatctcatatagtcgatgctagtgagagtcattcaccagttggtgaacagaatcctgtc
acagaaacaaaatttgttgatcagagatttgcaaactcgttatttctcatatgttatgag
gatgctctccgcttgtattctttaaagtcgttgtctcagggaagtcttgagagcaatatg
gaggtaagtcttccaaggccgtgttgctggatgggaatcctaaaaaaagatggaagggaa
tgtgcagtactcctgctttacagaacagggcatattgaaataagatctttcccgaagctt
gaagttgtgggagaaagctctttgctctcacttcttaggtggaactttaagcctaacatg
gagaagacagtatgttcggatgatttcggccatgtcgtcctggtaaatggttgtgaagtc
gccatcctttcgtttttggccaacacaaacggcttcaggctcccagagtctttacctttg
cttcatgacaaagtccttgcagcagctgctgacgctacctttagccatatctctgctcat
aaaaaaaatcatgatggcactcccaaattcctaagtaacattatcaaaggcttcagatca
agcagtgaacagaaggtggaccaagtacaagatttctcccacctggggaacatctttttt
aatccaccatacttgaagccttctgataccggtggtgacgacgaaaagattgtcgagctt
aacattgatgacattgagatcgacgaacctgtgatcgtcttgcctttgacagagaaagac
aaaaaagaaaagaaagataagagaacggataaggaaaaactgttcgacggtgcatccagc
aatgcacaacccaaaacgagaactgtggatgaaattaagtccaaatacagaaaagcaggg
gaaacctcggcaatagcgtcacaagcaaaagacaaacttcttgagcgtggagaaaaactc
gagagaataagccaacgcacagctgagcttcaagacggggctgagaactttgcatccatg
gcacatgaacttgctaaacaaatggagaagcgtaaatggtggaacatatga
DBGET
integrated database retrieval system
