Camelina sativa (false flax): 104768975
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Entry
104768975 CDS
T05044
Name
(RefSeq) structural maintenance of chromosomes protein 6A
KO
K22804
structural maintenance of chromosomes protein 6
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104768975
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
104768975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
AAA_29
Crescentin
AAA_13
SbcC_Walker_B
SMC_hinge
UvrA_DNA-bind
HSBP1
Baculo_PEP_C
ABC_tran
Motif
Other DBs
NCBI-GeneID:
104768975
NCBI-ProteinID:
XP_010491384
LinkDB
All DBs
Position
20:3145542..3152628
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AA seq
1056 aa
AA seq
DB search
MDEEHEHGDSFKDQRPSSGTIVRIRLENFMCHDNLEIEFGDSVNFITGQNGSGKSAILTA
LRVAFGCRAKGTQRATSLQDFIKTGCSYALVHVELRNQGGDAFKPEIYGDTLTVERRISD
STSLTVLKDHQGRKISSRREELRELVEHYNIDVENPCVIMSQEKSREFLNSGNDKDKFQF
FYKATLLQQVDELLQSIDTKLESANALLDEMEKTIQPIEKEISELLQKIKNMEQFEEITQ
QLLHLKKKLAWSWVYDVDRQLKEQTEKIVKLKERVPTCQNRIDQKLGEVESLRVSLTEKK
AQVACLMDESTAMKREIECLRQSVKMAAREKIALEEEFQHKCNNIQKIKDLVRRLERQIG
DINEMTTRSTQAEQSEIEEKLNLLKLEVEKAESLLSSLKEEENVVIEKALAGGQEKEHIE
AMIRDHEKKQRSINTQINDLKKHQTNKVTAFGGDRVINLLRAIERHHRRFNKPPIGPIGA
HVTLVNGNRWASAVEQALGNLLNAFIVNDHKDLVTLRHCGKEANYNNLKIIIYDFSRPRL
SIPRHMIPQTEHPTILSVLHSENNTVLNVLVDMSGVERQVLAENYEVGKTIAFERRLLNL
KDVFTIDGYRMFSRGPVQTTLPPHPRRTTRLCASFDDQIKDLEIEASKEQRDIQECRGQK
REAEMNLEGLESKMRGLKKQRTQLEKDLTRKELEMQDLKKSVASETKASPTSSVDELHLE
SMRFREEIKEKESLLEKFQDGLDEAELKANELKASYENLCESAKGEIESLEKAENELKEI
EEKLQYAETEKNHYEILMKDKVLPDIKQAEVLYQDLETKRQENNEKASIICPESEIRALG
PWDGATPLQLSAQINKINHRLSRENAKYSESIDDLRIMHDEKEQKIRKKSKIYKSFREKL
KVCRDVVGSRQSKLQLNKSHLKRQLTWQFNSNLSKKGISGQIMVSYPDKTLSLEVKMPQD
ATNSAVRDTRGLSGGERSFSTLCFALALHRMTEAPIRAMDEFDVFMDAVSRKISLDTLVD
FAIEKGSQWIFITPHDISMVKSHEMVKKQQLAAPRS
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaacatgaacatggcgattctttcaaggatcaacgacctagctccggtaca
atcgttaggatacgccttgagaattttatgtgccacgataatctcgagattgagtttggc
gactctgttaatttcatcactggtcaaaacggaagtggtaagagtgcaatactgactgcg
ctacgtgttgcctttggatgtcgagccaaaggtactcagcgcgccacttcgctgcaagat
ttcataaaaactggatgcagctatgctcttgttcatgttgaactgagaaaccaaggaggg
gatgcttttaagcctgagatatatggtgataccctgactgttgaacgcaggatatctgat
tccactagtttaacggttctcaaggatcatcaaggaagaaaaatatctagccgacgggag
gagctacgggaacttgttgaacattataatattgatgttgagaatccctgtgtgatcatg
agtcaagaaaagagcagggagtttttaaattctggaaatgacaaagataaattccagttc
ttttataaagcaacccttcttcagcaagtcgatgaacttcttcaaagtattgacacaaag
ttggaatctgcaaatgctcttctggatgagatggagaagaccatacaaccaatagaaaag
gagatcagtgagttgcttcaaaagatcaagaatatggagcaatttgaagaaataacccaa
cagttgctgcatttgaaaaagaaactagcttggtcatgggtatatgatgtggataggcag
ctcaaggaacagactgagaagatcgtcaaactcaaagaacgagtgcctacttgtcaaaat
agaattgatcagaaactgggtgaggtggaatctttaagggtaagtttgaccgagaagaaa
gctcaagttgcttgcctgatggatgaatcgactgcgatgaagagagagatagaatgtttg
cggcaatcagtgaagatggctgcaagagagaagatcgctttagaagaagaattccaacat
aagtgcaacaacattcagaagattaaggatcttgttaggaggcttgaacgacagattgga
gatattaatgaaatgactacaagaagcacacaggctgaacaatccgaaattgaagaaaaa
ctgaatctattgaagctagaggttgagaaggctgaatcattgctttccagtttgaaagag
gaggagaacgtggtaatagaaaaggcattagctggagggcaagagaaggaacacatagag
gctatgattagagaccatgaaaagaagcaaagaagcataaacacacagatcaatgatctg
aagaaacatcaaacaaataaggttaccgcatttggaggggacagagtcattaatctcttg
cgggctattgagagacatcaccgcagatttaataagccacccattggtccgattggtgct
catgtgacattggtcaatggtaatagatgggcttctgcagttgaacaagctcttggcaac
ctcctgaatgcctttattgtgaacgatcataaagatttagttactttgcgacactgtgga
aaggaagcaaattataacaatctgaagattatcatctatgacttttcaagaccaaggtta
agtataccaaggcacatgattcctcaaacagaacacccaactattctctctgtcttgcac
tctgagaataatactgttcttaatgtcttggtggatatgagtggtgtcgagaggcaagtg
cttgcagaaaattatgaggttggcaagaccattgcctttgagagaaggctcttgaatctg
aaggatgttttcactatagatggatacagaatgttttcccgtggacctgttcagactacg
cttcctcctcatcctcgaaggactactcgattgtgtgcttctttcgatgaccaaatcaaa
gatcttgaaatagaggcctcaaaagaacaaagggacatacaagaatgcaggggacaaaag
agggaggcagaaatgaatctcgagggtcttgaatctaaaatgcgcggactgaagaagcaa
cgcacccaactagagaaagatttgacgaggaaggaacttgaaatgcaggatctgaaaaaa
tcagtcgcttctgaaaccaaagcatcacctacatcaagtgttgatgagcttcatctagaa
agcatgagattccgagaagagataaaggagaaagaatccttgctggaaaagtttcaagac
ggtttggatgaagctgaattaaaggctaatgaacttaaagcttcatatgaaaacttatgt
gagtcagccaagggtgaaattgaatctcttgagaaagcagagaacgagctaaaggagata
gaagaaaaactccaatacgcagaaacggagaagaaccattatgagattcttatgaaggac
aaggtcttacccgatatcaaacaggctgaagttttatatcaggatcttgaaacgaagcgg
caggaaaataatgagaaggcctcaatcatttgtcctgagagtgagataagagctttgggc
ccttgggatggggccactcctttgcagcttagtgctcagattaacaaaataaatcatagg
ctgagccgagagaatgccaagtattctgaatcaatcgatgacctcaggattatgcacgat
gaaaaagaacagaagattaggaagaaaagcaaaatttacaaaagctttcgagaaaagctc
aaggtctgcagagatgtggtaggttcacggcagagcaagctccaattaaataaatctcat
ctgaagcgccagttaacttggcaattcaactctaacttaagtaaaaaaggtatcagtgga
caaatcatggtctcttatccagacaaaactttgtccctagaggttaagatgcctcaagat
gcaacaaacagtgctgttcgagacacaagaggactttcaggtggggaacggtctttctcg
actttatgctttgcattagctcttcacaggatgactgaagccccaattcgagcaatggac
gaatttgatgtatttatggacgcagttagcaggaaaatcagcttagacacattggttgat
tttgcaatagagaaaggttcacagtggatattcatcactcctcatgatatcagtatggtg
aagtcacacgagatggtaaagaagcaacaactagctgctcctcgttcttga
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