Camelina sativa (false flax): 104769108
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Entry
104769108 CDS
T05044
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 2
KO
K12195
charged multivesicular body protein 6
Organism
csat
Camelina sativa (false flax)
Pathway
csat03250
Viral life cycle - HIV-1
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104769108
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104769108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104769108
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104769108
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
104769108
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104769108
Exosomal proteins of other body fluids (saliva and urine)
104769108
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Snf7
TINF2_N
HAUS5
CesT_Tir_1
DUF1269
DUF7750
FUSC
Spo16_C
Motif
Other DBs
NCBI-GeneID:
104769108
NCBI-ProteinID:
XP_010491543
UniProt:
A0ABM0XVC5
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All DBs
Position
20:3769979..3771920
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AA seq
219 aa
AA seq
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MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL
ALKKKRTQEDLLKQVDQWVINVEQQLADIELTSKQKAVFESLKQGNSAIKAIQSEVNLDD
VQKLMDDTAEAKAYQDELSAILGEKLSAEDEEEILAEFDNLESLLIDEDMPEVPTTELVP
EEPEKLDLPDVPTKAPVASNAEITPAPTKRKVLEEPLEA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggggaatttgttcgtgaagaaaccaaagatcacggaggttgatcgagcgattctctct
cttaaaacccaaagacgcaagcttggtcaatatcagcaacagcttgagaaagtaattgaa
gctgagaagcaagctgcgagagacttaatccgtgagaagcgaaaagatagggctttgtta
gcactgaagaagaagcggacgcaagaagacttgttgaagcaagtagatcagtgggtcatc
aatgttgagcaacaattggcagatattgaacttacaagcaagcaaaaggcagtctttgag
agtttaaagcaaggtaatagtgcaattaaggcgatacagagtgaggtcaaccttgatgat
gttcaaaaactaatggatgacactgccgaggccaaggcttatcaggatgaactgagtgcc
atattaggtgagaaactatcagcagaagatgaagaagagatcttagcagaattcgacaac
ctagaaagtctgctgattgatgaagatatgcctgaagtgcctacgacagagctcgtgcct
gaagaacctgagaaattggatctccctgatgtgccaacaaaagcaccggtggcttccaat
gcagaaatcactccagctccaacaaagagaaaagttcttgaagaacctttggaagcttga
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