Camelina sativa (false flax): 104769575
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Entry
104769575 CDS
T05044
Name
(RefSeq) mRNA-decapping enzyme subunit 2 isoform X1
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104769575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104769575
Enzymes [BR:
csat01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
104769575
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104769575
mRNA degradation factors
5'-3' decay
Decapping complex
104769575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
DUF5420
DUF226
Motif
Other DBs
NCBI-GeneID:
104769575
NCBI-ProteinID:
XP_010492117
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Position
20:5995219..5999228
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AA seq
366 aa
AA seq
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MSGLHRSSSSSKNIGNCLPSKELLDDLCSRFVLNVPEEDQQSFERILFLVEYAYWYYEDN
AVENDPKLKSLSLKEFTSLLFNSCDVLRPYVTHIDDIFKDFTSYKCRVPVTGAIILDETY
ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSKLLKKEEYIEFVFRQQ
RVRLYIVAGVTEDTLFAPQTKKEISEITWHRLDHLQPASNEVITHGVSGLKLYMVAPFLS
SLKSWIIKHPSPVARRPNKPLKALCVWNARTIVGGNGTATVESHNRKPEVKTTTVESHNR
KPELKTTTTMESHSTKPELRTASMESHNTRPEVDHPQDIVPESSFRNFKFDTSAILQAAM
ECDFSA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtctccatcgatcttcgagttcatcgaagaacatcggtaattgccttccttcc
aaggaacttcttgatgatctttgcagtcgattcgttttgaacgtccctgaagaagatcaa
cagtctttcgagagaattctgtttctggtggagtatgcttattggtactatgaagataat
gctgtagagaatgatcctaagctcaagtccttgtccttgaaagagtttacttccctctta
ttcaacagctgtgatgtgttgagaccttatgttactcatattgatgacattttcaaagac
tttacttcttacaagtgtcgagttcctgtcactggagctattatcctggatgagacatat
gaacggtgcttgttggtgaagggctggaaaggatcaagctggagctttccccgcggaaag
aagagcaaggatgaagaagaccatgcttgtgccattcgtgaggtcttagaggaaactgga
tttgatgtctcaaagctactcaagaaagaagaatatatagagtttgtattcaggcagcaa
agagtacgactatacatagttgctggggtgactgaggatacactttttgcaccacaaaca
aagaaggaaatcagtgaaattacatggcaccggctcgatcatctacagccagcaagtaat
gaggtgataactcatggagtttctggtctcaaactgtacatggtggcaccttttctttcg
tcgttgaagtcgtggataataaaacatccgtcacctgtagcacgaagacctaacaagccc
cttaaagcactctgcgtgtggaatgcaaggactattgttggagggaacgggacagcaaca
gtggaaagccacaataggaaacctgaagtcaagacaacaacagtagaaagccacaataga
aaacctgaactcaagacaacaacaacaatggagagccacagtacaaagcctgaactcagg
acagcctcaatggaaagccacaacacaaggcctgaagtcgaccatcctcaggacatagta
cctgaaagcagtttcagaaacttcaagttcgacacgtcagctatcttacaggcggcgatg
gaatgtgatttttcagcttga
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