Camelina sativa (false flax): 104769694
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Entry
104769694 CDS
T05044
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial-like isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104769694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104769694
03016 Transfer RNA biogenesis [BR:
csat03016
]
104769694
Enzymes [BR:
csat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
104769694
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
104769694
Transfer RNA biogenesis [BR:
csat03016
]
Prokaryotic type
tRNA degradation factors
104769694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
Motif
Other DBs
NCBI-GeneID:
104769694
NCBI-ProteinID:
XP_010492266
UniProt:
A0ABM0XX54
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All DBs
Position
20:complement(6572678..6579060)
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AA seq
996 aa
AA seq
DB search
MSSIVNRAKSSSLPNLLAWRALGFRTICSGRLGFAPSDPDSPASAGTKILESFKEEFEVG
SRVVSFETGKIARFANGSVVLGMDQTKVLSTVTCAKTDSPKDFLPLTVDYQEKQYAQGLI
PNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMASVLSSDGKQDPDILAANA
SSAALMLSDVPWGGPIGVIRIGRIYGQFVVNPTMDELSSSDLNLIYACTRDKTMMIDVQS
REISEKDLAAALRLAHPEAVKYLDPQIRLAEKAGKQKKEYKLSMLSEKTLEKVTDLAATR
IESVFTDPSYGKFERGEALDNIGKDVRRVFEEEGDQESLSILPKAVDTVRKKVVRSRMIS
DGFRVDGRNLDEVRPIYCESSYLPALHGSALFSRGDTQVLCTVTLGAPGDAQSLDSLVGP
PKKRFMLHYSFPPYCTNEVGKRGGLNRREVGHGTLAEKALLAVLPPEEAFPYTVRINSEV
MSSDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGL
EDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENAREARLQILDHMERNINSP
RSQDGASSPRLATLKYSNDSLRSLIGPMGVLKRKIEEETGARLTIDDGTLTIVAKNHAVM
EKAQEKVDLIIGREIIAGNVYKGTVVTIKEYGAFVEFSGGQQGLLHMSELSHEPVSKVSD
VLSIGNYITVKCIDTDVRGNIKLSLKALSPKPKRKPESDPEKYPVMKESSTVSIETSSVG
ETVASMPSKVTPPQKSKLAVPAVVIRTAVDCDEAEKFSPVEKNNNPKRAATPKPDRKPKS
TTSKLTASQKEEEALELCAPEEISAECGESLKQDGKLKSASPKNNSTASTVSDSNLVSSP
KAKKSTRKEDQYENKAEENATVSTRNLKIGTEMMAKVQEVRPLGLVLDLGGGIRGMYKFE
DNEETEFKKGDTLQVKCTSFTTKGVPEMVLVDEEED
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaattgtgaatcgagctaagtcatcttctcttccgaatcttctcgcatggcgt
gctttaggttttcgtactatctgctctggccgccttggtttcgctccctctgatccagac
tcgccggcctccgcaggaaccaaaatattggaatcttttaaggaagagttcgaagttgga
tcccgcgttgtatcgttcgagactggcaaaatcgctcgcttcgctaatggttcagttgtt
ctgggcatggaccagaccaaagttctatctactgttacctgtgctaagaccgactctccc
aaagatttcttgcctctcactgttgactatcaagagaagcaatacgctcaaggtttgatt
ccaaatacatatatgcgaagagagggtgcaccaaaggagcgggagctgttatgtggccgg
ctcattgatagaccaatcagacccttgtttccttcagggttttaccatgaagttcagata
atggctagtgttctatcgtcggatgggaagcaggatccagatatactagcagctaatgca
tcatcagctgccttaatgctatcggatgttccatggggaggacccattggagtcattcga
ataggaaggatctatgggcagtttgttgtcaatcctactatggatgagcttagctcaagt
gatctcaatttgatatacgcttgcacaagagataagaccatgatgattgatgttcaatcc
cgtgaaatatcagagaaagatttagcagctgcactgaggctagctcatccagaggctgtt
aagtaccttgatccccaaataagattggcagaaaaagctgggaaacaaaagaaggagtac
aaattgtccatgctttctgagaaaactttagaaaaagtgactgacttggctgcaacgcgt
attgaatccgtctttactgacccttcttatggaaagtttgaacgtggagaggctctagat
aacattggaaaagatgtaagaagagtatttgaagaagaaggtgatcaagaaagcttgagc
atccttccaaaggctgttgatacagtgagaaagaaggtagtccgttcaaggatgatatca
gatggatttcgagttgacgggagaaatcttgatgaagttaggcccatctattgcgaatcc
agttatttacctgcgctgcatggatcagcacttttctcacgtggagatacgcaggtgctc
tgtaccgtcacacttggagccccgggagatgcacaaagcttggattcccttgttggcccc
ccgaaaaagagatttatgcttcactacagctttcctccatattgtacaaatgaagtcgga
aaacgaggtggccttaacaggcgtgaagttggtcatggaacgcttgctgagaaagcattg
cttgctgtcttgccccctgaagaggcttttccttatacagttcgtataaattcagaagta
atgtcctcagatggatccacgtcaatggcaagcgtttgcggaggtagtatggcattaatg
gatgccggaatccctctgcgagctcatgttgcgggtgtctccgttggtcttgtcaccgat
gtagatccatcaagtggtgaaataaaggactaccgtatagtaactgatattctgggtttg
gaagatcatctgggagatatggatttcaagattgctggcacacgaaatggtgtgacagcg
attcagctggatataaagccagctggaataccgttggacatagtttgtgaatccttagaa
aatgcacgtgaagcccgtcttcagattcttgaccacatggagagaaacataaattcccca
cgaagccaggatggggcttcttctcctcggctagcaacgttgaagtacagcaatgactca
cttcgtagcttgatcggacctatgggtgtactcaagagaaagattgaagaggaaacaggt
gcaagattgactattgacgatggaacattaactattgttgccaagaatcacgctgtgatg
gaaaaggctcaagaaaaggttgacctcatcattggtcgtgaaataattgctggtaacgtg
tacaaaggcacagtggtaactataaaagagtacggtgcatttgttgagttcagtggtggt
cagcaaggtctactacatatgtctgagctatctcatgaaccagtctccaaggtttcagat
gtattatctattggcaactacatcactgtgaagtgcatcgataccgatgtccgcggtaac
attaaattatctctcaaagcattgtcgcccaaacccaaacgcaaaccagaatctgatcct
gagaaatacccggtgatgaaagagtcgtcaacagtctccatagaaacgtctagtgttgga
gagacagttgcaagcatgcccagtaaagtaacgccacctcagaaatctaaattagcagtt
cctgcagttgttatccgtactgctgtagattgtgatgaggcagagaaattttcccctgtg
gagaagaacaacaatcctaaacgcgccgcaacaccgaagccagaccggaaacccaaatcc
actacctctaagctgactgcatcacaaaaggaagaagaggcactcgaactttgtgctcca
gaagaaattagtgctgagtgtggtgagtcactgaagcaagacgggaaactaaaatccgct
tctcccaaaaacaatagcactgcttcaactgtttctgattctaatctagtatcatctcca
aaagctaagaaatcaactaggaaggaggatcaatatgagaacaaggctgaagagaatgca
acggttagtacccgaaacctgaaaataggaacagagatgatggccaaggtgcaagaggtt
cgaccccttggattggttcttgatttaggtggtggaatccgcggtatgtacaaattcgag
gataatgaagaaacagagtttaaaaagggagacacattgcaagtaaaatgtacaagtttt
acaacaaaaggagtccctgagatggttttggttgacgaagaggaagactag
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