Camelina sativa (false flax): 104769703
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Entry
104769703 CDS
T05044
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104769703
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104769703
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
DUF5666
Motif
Other DBs
NCBI-GeneID:
104769703
NCBI-ProteinID:
XP_010492279
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Position
20:6605734..6608727
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AA seq
456 aa
AA seq
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MNRLTLKYLSLNFLLLVSLLSSRFGTCDARQSVYWKGNRRSIAEGESSATINVLDHGAKG
DGTSDDTKAFEDAWEEACKVAASTLLIPSDSTFLVGPVSFLGKGCKENIVFQLDGKIIAP
TSSSAWGSGLLQWIEFKSLTGITIKGKGIIDGRGSVWWNKSPDYDPADESESTTTNDMVK
EQLGTKMPKTKPTALRFYGSNGVTVNGITIQNSPQTHLKFDNCMSIQVSDFTTSSPGDSP
NTDGIHLQNSQDAVIYRSTLACGDDCISIQTGCSNIYIHDVDCGPGHGISIGGLGKDNTK
ACVSNITVRDVTMHETTNGVRIKSWQGGSGSVKQVMFSNIQVSNVANPIIIDQYYCDGGG
CHNETSAVAVSNINYINIKGTYTKQPIRFACSDSLPCTGISLSTIELKPATEKASSFDPF
CWEAHGELKTQTIPPIQCLKTEKSPEAASQSNNDAC
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaatagactaaccttgaaatatctttccctcaactttctcctcttagtctccttactc
tcttcgagatttggaacttgtgacgctaggcagagtgtatactggaaaggaaaccgcagg
tctatcgccgaaggggaaagttccgcaacaatcaatgtgcttgaccatggcgcaaaaggt
gatgggacaagtgatgacacaaaggctttcgaagatgcttgggaggaagcttgtaaggtg
gcagcgtcaacattattaattccatctgattctacgttccttgttggacctgtttccttc
ctgggaaaaggatgtaaagagaacatcgtgtttcagctagatggaaagatcatagctcca
acgagttcaagtgcatggggttcaggtctcttgcaatggatagaattcaaatcacttaca
ggaatcactataaaaggaaaaggaattattgatggacgaggctcagtatggtggaacaag
tcacctgactatgatccagctgatgagtcagagtcaacaactacgaacgacatggtgaaa
gaacaactgggtacaaaaatgccaaagactaaaccaacagctttgaggttctacgggagt
aatggtgtaacagtcaatggaataaccatacaaaacagccctcaaacccacctcaagttt
gataattgcatgagcattcaagtgtctgattttacaacttcatcccccggagattccccc
aacacagatggaatccacctgcaaaactctcaagatgccgttatttaccgcagcacgctg
gcttgtggagatgattgtatatcaattcaaactggatgctctaatatctacatacatgat
gttgactgtgggcctggccatggaattagcatcggaggactgggaaaggacaatacaaaa
gcgtgtgtttcaaacattactgtccgtgatgtcacgatgcatgaaactacgaatggagtt
cgaataaaatcctggcagggagggtcagggtctgtaaaacaagttatgttttcaaatatt
caagtcagcaacgtagccaatccgataataatagatcaatactattgcgatggtggagga
tgccacaacgaaacttccgcagtggctgtatcaaacataaactacataaacataaagggt
acctacacaaagcaacctatacgcttcgcctgcagtgatagcttgccatgcacaggaatc
tcactttcgaccatagagcttaagccagccacagaaaaagcaagctcatttgatcctttc
tgctgggaagcacacggtgaactgaaaacacaaactataccaccaatacaatgtttgaaa
acagaaaagtcaccagaagctgcaagtcagtctaataatgatgcttgctaa
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